RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 GIPC3Q8TF64 312 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 HSD17B8Q92506 261 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 MARVELD3Q96A59 401 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 TNFRSF13CQ96RJ3 184 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 EMC6Q9BV81 110 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 ULBP2Q9BZM5 246 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 TXNIPQ9H3M7 391 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 MGAT4BQ9UQ53 548 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 NPIPB13A6NJU9 1138 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 CENPBD1B2RD01 187 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 NPIPB4C9JG80 1138 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 M0R3G1 203 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 GOSR1O95249 250 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 CDH2P19022 906 aaPredicted RBP12.44□□□□□ -0.42
SSBP3-208ENST00000444533 COX5AP20674 150 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 IGHV1-2P23083 117 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 NOS3P29474 1203 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 SSTR2P30874 369 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 SLC6A6P31641 620 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 GUCA1AP43080 201 aaPredicted RBP12.44□□□□□ -0.42
SSBP3-208ENST00000444533 RPS6KA3P51812 740 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 RPL27P61353 136 aaKnown RBP12.44□□□□□ -0.42
SSBP3-208ENST00000444533 LSM11P83369 360 aaKnown RBP eCLIP12.44□□□□□ -0.42
SSBP3-208ENST00000444533 ROR2Q01974 943 aaKnown RBP12.44□□□□□ -0.42
SSBP3-208ENST00000444533 TSPAN31Q12999 210 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 MELKQ14680 651 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 ACKR1Q16570 336 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 C1QTNF12Q5T7M4 302 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 ANKRD34AQ69YU3 496 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 C1orf94Q6P1W5 598 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 SMARCD3Q6STE5 483 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 AQP11Q8NBQ7 271 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 C1orf162Q8NEQ5 155 aaPredicted RBP12.44□□□□□ -0.42
SSBP3-208ENST00000444533 OR10G2Q8NGC3 310 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 MOSPD2Q8NHP6 518 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 LINC01560Q8TB33 94 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 STMN2Q93045 179 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 TXNDC15Q96J42 360 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 ALKBH3Q96Q83 286 aaPredicted RBP12.44□□□□□ -0.42
SSBP3-208ENST00000444533 FUZQ9BT04 418 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 ARMC1Q9NVT9 282 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 CRIM1Q9NZV1 1036 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 KIF17Q9P2E2 1029 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 POFUT2Q9Y2G5 429 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 USP9YO00507 2555 aaPredicted RBP12.44□□□□□ -0.42
SSBP3-208ENST00000444533 HCFC1P51610 2035 aa12.44□□□□□ -0.42
SSBP3-208ENST00000444533 COL12A1Q99715 3063 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 ARRDC5A6NEK1 342 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 CDC42EP2O14613 210 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 TIPRLO75663 272 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 RAD51DO75771 328 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 ZNF432O94892 652 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 WNT11O96014 354 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 CD14P08571 375 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 TSPAN19P0C672 248 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 FUT4P22083 530 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 PAX7P23759 505 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 NTF4P34130 210 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 LIMS1P48059 325 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 ZNF84P51523 738 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 UBE2NP61088 152 aaKnown RBP12.43□□□□□ -0.42
SSBP3-208ENST00000444533 ACTR3P61158 418 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 CD47Q08722 323 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 SNTB1Q13884 538 aaKnown RBP12.43□□□□□ -0.42
SSBP3-208ENST00000444533 CCNIQ14094 377 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 KPNB1Q14974 876 aaKnown RBP12.43□□□□□ -0.42
SSBP3-208ENST00000444533 TIMM23BQ5SRD1 257 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 C9orf135Q5VTT2 229 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 GPR139Q6DWJ6 353 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 ALKBH2Q6NS38 261 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 PGBD2Q6P3X8 592 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 DPY19L2P2Q6ZN68 376 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 ZER1Q7Z7L7 766 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 C20orf196Q8IYI0 205 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 C17orf78Q8N4C9 275 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 ZNF433Q8N7K0 673 aaPredicted RBP12.43□□□□□ -0.42
SSBP3-208ENST00000444533 OR9Q2Q8NGE9 314 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 OR4C15Q8NGM1 316 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 S100PBPQ96BU1 408 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 ZC3HAV1LQ96H79 300 aaKnown RBP12.43□□□□□ -0.42
SSBP3-208ENST00000444533 RBP7Q96R05 134 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 KATNB1Q9BVA0 655 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 CRLF2Q9HC73 371 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 MOV10Q9HCE1 1003 aaKnown RBP12.43□□□□□ -0.42
SSBP3-208ENST00000444533 PDP1Q9P0J1 537 aaPredicted RBP12.43□□□□□ -0.42
SSBP3-208ENST00000444533 SIGLEC7Q9Y286 467 aa12.43□□□□□ -0.42
SSBP3-208ENST00000444533 MAGED1Q9Y5V3 778 aaPredicted RBP12.43□□□□□ -0.42
SSBP3-208ENST00000444533 UPK3AO75631 287 aa12.42□□□□□ -0.42
SSBP3-208ENST00000444533 IGHMP01871 453 aa12.42□□□□□ -0.42
SSBP3-208ENST00000444533 ACADSP16219 412 aa12.42□□□□□ -0.42
SSBP3-208ENST00000444533 ACVR1BP36896 505 aa12.42□□□□□ -0.42
SSBP3-208ENST00000444533 COX10Q12887 443 aa12.42□□□□□ -0.42
SSBP3-208ENST00000444533 PPP1R8Q12972 351 aaKnown RBP12.42□□□□□ -0.42
SSBP3-208ENST00000444533 ANKRD16Q6P6B7 361 aa12.42□□□□□ -0.42
SSBP3-208ENST00000444533 IGFN1Q86VF2 1251 aa12.42□□□□□ -0.42
SSBP3-208ENST00000444533 TMEM123Q8N131 208 aa12.42□□□□□ -0.42
SSBP3-208ENST00000444533 ATG16L2Q8NAA4 619 aa12.42□□□□□ -0.42
SSBP3-208ENST00000444533 NOXO1Q8NFA2 376 aa12.42□□□□□ -0.42
SSBP3-208ENST00000444533 ASB10Q8WXI3 467 aa12.42□□□□□ -0.42
SSBP3-208ENST00000444533 DNAJC9Q8WXX5 260 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms