RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 STARP49675 285 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 ZNF136P52737 540 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 CLDN20P56880 219 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 EBPQ15125 230 aaKnown RBP6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 TMEM176BQ3YBM2 270 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 ZNF385CQ66K41 422 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 RASSF6Q6ZTQ3 369 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 OR4K5Q8NGD3 323 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 OR5M1Q8NGP8 315 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 CDS1Q92903 461 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 ZNF775Q96BV0 537 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 ANKRD19PQ9H560 264 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 GALNT9Q9HCQ5 603 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 CHST11Q9NPF2 352 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 IMPAD1Q9NX62 359 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 SLCO1C1Q9NYB5 712 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 SLC9A8Q9Y2E8 581 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 CENPBD1B2RD01 187 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 MCIDASD6RGH6 385 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 UQCRFS1P47985 274 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 GLCCI1Q86VQ1 547 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 GCNT2Q8N0V5 402 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 ANKRD9Q96BM1 317 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 OTULINQ96BN8 352 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 C16orf58Q96GQ5 468 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 LRR1Q96L50 414 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 TMEM43Q9BTV4 400 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 POLR2J3Q9H1A7 115 aaKnown RBP6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 ZNF556Q9HAH1 456 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 RANGRFQ9HD47 186 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 CTPS2Q9NRF8 586 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 SNTG1Q9NSN8 517 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 CLEC4AQ9UMR7 237 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 BOLA1Q9Y3E2 137 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 CDH10Q9Y6N8 788 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 CCDC182A6NF36 153 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 G3V3Q6 166 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 CDRT1O95170 752 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 TSPAN31Q12999 210 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 GXYLT1Q4G148 440 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 PLA1AQ53H76 456 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 BICRALQ6AI39 1079 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 C22orf42Q6IC83 251 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 METAP1DQ6UB28 335 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 PXKQ7Z7A4 578 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 TMEM251Q8N6I4 163 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 RPS4Y2Q8TD47 263 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 TM9SF2Q99805 663 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 ZNF559Q9BR84 538 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 TTTY12Q9BZ98 90 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 SAP130Q9H0E3 1048 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 NGBQ9NPG2 151 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 KLHL21Q9UJP4 597 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 ZNF221Q9UK13 617 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 PCDH15Q96QU1 1955 aa6.67□□□□□ -1.34
CDC42BPA-208ENST00000442054 SPEGQ15772 3267 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 HRKO00198 91 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 SULT2B1O00204 365 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 CDC42EP2O14613 210 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 ZNHIT1O43257 154 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 TLX2O43763 284 aaPredicted RBP6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 ALX3O95076 343 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 PDGFAP04085 211 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 SMIM10L1P0DMW3 83 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 MAP4K2Q12851 820 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 HNRNPA0Q13151 305 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 GINS1Q14691 196 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 ZNF311Q5JNZ3 666 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 TMPRSS11AQ6ZMR5 421 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 WDR88Q6ZMY6 472 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 MEX3BQ6ZN04 569 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 SHISA5Q8N114 240 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 LINC00471Q8N535 108 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 SLC16A11Q8NCK7 471 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 OR7G2Q8NG99 324 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 OR8K3Q8NH51 312 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 ZFAND1Q8TCF1 268 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 SMIM10Q96HG1 83 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 PRR14Q9BWN1 585 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 POLR2J2Q9GZM3 115 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 POLR1DQ9Y2S0 133 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 LOC102723996A0A087X1L8 192 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 LANCL1O43813 399 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 TPPPO94811 219 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 NAGAP17050 411 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 PSMA1P25786 263 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 SLC1A3P43003 542 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 PNLIPRP2P54317 469 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 EEF1A1P68104 462 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 C3AR1Q16581 482 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 CCDC92Q53HC0 331 aaPredicted RBP6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 EIPR1Q53HC9 387 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 DCST2Q5T1A1 773 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 NOXA1Q86UR1 476 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 CPAMD8Q8IZJ3 1885 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 BBS10Q8TAM1 723 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 RASSF5Q8WWW0 418 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 MUCL1Q96DR8 90 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 SPRY4Q9C004 299 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms