RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 CASRP41180 1078 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 GCGRP47871 477 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 TGM4P49221 684 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 TPTEP56180 551 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 OR1Q1Q15612 314 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 KCNJ8Q15842 424 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 DUSP5Q16690 384 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 CRTC2Q53ET0 693 aaPredicted RBP4.31□□□□□ -1.72
EDEM3-203ENST00000439962 KCTD20Q7Z5Y7 419 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 PXKQ7Z7A4 578 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 NRMQ8IXM6 262 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 OR8H2Q8N162 312 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 COX18Q8N8Q8 333 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 GRPEL2Q8TAA5 225 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 TM9SF4Q92544 642 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 CREB3L1Q96BA8 519 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 C1GALT1C1Q96EU7 318 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 ZNF486Q96H40 463 aaPredicted RBP4.31□□□□□ -1.72
EDEM3-203ENST00000439962 ATF6BQ99941 703 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 UTP23Q9BRU9 249 aaKnown RBP4.31□□□□□ -1.72
EDEM3-203ENST00000439962 OR52D1Q9H346 318 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 EGLN3Q9H6Z9 239 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 EXO5Q9H790 373 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 RNF121Q9H920 327 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 DIABLOQ9NR28 239 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 TAS2R16Q9NYV7 291 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 COPS7AQ9UBW8 275 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 SLC7A7Q9UM01 511 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 SIGLEC7Q9Y286 467 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 ACANP16112 2415 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 ANKUB1A6NFN9 424 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 PRR23D1E9PI22 279 aaPredicted RBP4.31□□□□□ -1.72
EDEM3-203ENST00000439962 NPIPB9F8W1W9 429 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 CASKO14936 926 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 OGG1O15527 345 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 LRRTM2O43300 516 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 TMCC2O75069 709 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 TRAPPC6AO75865 159 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 CCNKO75909 580 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 ARL6IP5O75915 188 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 HPP00738 406 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 SERPINA7P05543 415 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 YES1P07947 543 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 CSF3P09919 207 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 OR2T7P0C7T2 308 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 PRR23D2P0DMB1 279 aaPredicted RBP4.31□□□□□ -1.72
EDEM3-203ENST00000439962 MYL9P24844 172 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 APEX1P27695 318 aaKnown RBP4.31□□□□□ -1.72
EDEM3-203ENST00000439962 CFPP27918 469 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 GTF2E2P29084 291 aaKnown RBP4.31□□□□□ -1.72
EDEM3-203ENST00000439962 MNDAP41218 407 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 RFX2P48378 723 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 CYB561P49447 251 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 AGFG1P52594 562 aaKnown RBP4.31□□□□□ -1.72
EDEM3-203ENST00000439962 CLDN20P56880 219 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 NRG3P56975 720 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 RPS25P62851 125 aaKnown RBP4.31□□□□□ -1.72
EDEM3-203ENST00000439962 FABP5Q01469 135 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 PLGLB1Q02325 96 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 IKZF1Q13422 519 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 SERTAD2Q14140 314 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 FGFBP1Q14512 234 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 ZNF169Q14929 603 aaPredicted RBP4.31□□□□□ -1.72
EDEM3-203ENST00000439962 QPRTQ15274 297 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 ZNF766Q5HY98 468 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 EMC4Q5J8M3 183 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 TRIQKQ629K1 86 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 ULK3Q6PHR2 472 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 FAM180AQ6UWF9 173 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 OLIG3Q7RTU3 272 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 LAX1Q8IWV1 398 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 IQCF1Q8N6M8 205 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 ZNF614Q8N883 585 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 SLC16A11Q8NCK7 471 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 APCDD1LQ8NCL9 501 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 C19orf18Q8NEA5 215 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 ATP6V1C2Q8NEY4 427 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 OR2T27Q8NH04 317 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 NEIL3Q8TAT5 605 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 PTPMT1Q8WUK0 201 aaPredicted RBP4.31□□□□□ -1.72
EDEM3-203ENST00000439962 TRIM63Q969Q1 353 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 DIRAS2Q96HU8 199 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 FRMD6Q96NE9 622 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 KCNS3Q9BQ31 491 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 WFDC6Q9BQY6 131 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 MARVELD1Q9BSK0 173 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 TMEM43Q9BTV4 400 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 SLC26A1Q9H2B4 701 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 ABCB9Q9NP78 766 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 CYSLTR2Q9NS75 346 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 HPF1Q9NWY4 346 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 GPR55Q9Y2T6 319 aaPredicted RBP4.31□□□□□ -1.72
EDEM3-203ENST00000439962 KCNE3Q9Y6H6 103 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 A0A1W2PQ09 198 aa4.3□□□□□ -1.72
EDEM3-203ENST00000439962 MEIOCA2RUB1 952 aa4.3□□□□□ -1.72
EDEM3-203ENST00000439962 NPIPA2E9PIF3 369 aa4.3□□□□□ -1.72
EDEM3-203ENST00000439962 NPIPA3F8WFD2 350 aa4.3□□□□□ -1.72
EDEM3-203ENST00000439962 M0R129 80 aa4.3□□□□□ -1.72
EDEM3-203ENST00000439962 GTPBP1O00178 669 aaKnown RBP4.3□□□□□ -1.72
EDEM3-203ENST00000439962 RGS5O15539 181 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms