RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ALG10Q5BKT4 473 aa10.38□□□□□ -0.75
HSPG2-206ENST00000439717 C9orf135Q5VTT2 229 aa10.38□□□□□ -0.75
HSPG2-206ENST00000439717 CARD17Q5XLA6 110 aa10.38□□□□□ -0.75
HSPG2-206ENST00000439717 LINGO2Q7L985 606 aa10.38□□□□□ -0.75
HSPG2-206ENST00000439717 CDC20BQ86Y33 519 aa10.38□□□□□ -0.75
HSPG2-206ENST00000439717 OR4K5Q8NGD3 323 aa10.38□□□□□ -0.75
HSPG2-206ENST00000439717 OR1K1Q8NGR3 316 aa10.38□□□□□ -0.75
HSPG2-206ENST00000439717 OR52J3Q8NH60 311 aa10.38□□□□□ -0.75
HSPG2-206ENST00000439717 MAGEE2Q8TD90 523 aaPredicted RBP10.38□□□□□ -0.75
HSPG2-206ENST00000439717 ZNF566Q969W8 418 aa10.38□□□□□ -0.75
HSPG2-206ENST00000439717 PIK3IP1Q96FE7 263 aa10.38□□□□□ -0.75
HSPG2-206ENST00000439717 SLC25A44Q96H78 314 aaPredicted RBP10.38□□□□□ -0.75
HSPG2-206ENST00000439717 ALPK1Q96QP1 1244 aa10.38□□□□□ -0.75
HSPG2-206ENST00000439717 CADM1Q9BY67 442 aaKnown RBP10.38□□□□□ -0.75
HSPG2-206ENST00000439717 NDEL1Q9GZM8 345 aa10.38□□□□□ -0.75
HSPG2-206ENST00000439717 GPR35Q9HC97 309 aa10.38□□□□□ -0.75
HSPG2-206ENST00000439717 OBP2BQ9NPH6 170 aa10.38□□□□□ -0.75
HSPG2-206ENST00000439717 TMCC3Q9ULS5 477 aa10.38□□□□□ -0.75
HSPG2-206ENST00000439717 EDARQ9UNE0 448 aa10.38□□□□□ -0.75
HSPG2-206ENST00000439717 SLC25A15Q9Y619 301 aa10.38□□□□□ -0.75
HSPG2-206ENST00000439717 ITPR2Q14571 2701 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.37□□□□□ -0.75
HSPG2-206ENST00000439717 MCIDASD6RGH6 385 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 M0R3G1 203 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 CDC42EP2O14613 210 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 WNT11O96014 354 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 IGHG1P01857 330 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 IGHMP01871 453 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 F13BP05160 661 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 RAP2AP10114 183 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 LOXP28300 417 aaPredicted RBP10.37□□□□□ -0.75
HSPG2-206ENST00000439717 GPR4P46093 362 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 OMPP47874 163 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 LIMS1P48059 325 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 CSNK1A1P48729 337 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 FLOT2Q14254 428 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 SEC23BQ15437 767 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 CEACAM16Q2WEN9 425 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 ZBED5Q49AG3 693 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 ANKRD16Q6P6B7 361 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 KLHL24Q6TFL4 600 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 SEZ6L2Q6UXD5 910 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 LINC00471Q8N535 108 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 OR13C2Q8NGS9 318 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 OR6N1Q8NGY5 312 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 OR51A7Q8NH64 312 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 MOSPD2Q8NHP6 518 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 ASB10Q8WXI3 467 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 TMEM54Q969K7 222 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 PLPPR2Q96GM1 343 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 FAM46AQ96IP4 442 aaKnown RBP10.37□□□□□ -0.75
HSPG2-206ENST00000439717 TNFRSF13CQ96RJ3 184 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 LRMDAQ9H2I8 198 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 TXNIPQ9H3M7 391 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 ESRP2Q9H6T0 727 aaKnown RBP10.37□□□□□ -0.75
HSPG2-206ENST00000439717 CRLF2Q9HC73 371 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 MOV10Q9HCE1 1003 aaKnown RBP10.37□□□□□ -0.75
HSPG2-206ENST00000439717 SLC17A5Q9NRA2 495 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 AURKCQ9UQB9 309 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 POMPQ9Y244 141 aa10.37□□□□□ -0.75
HSPG2-206ENST00000439717 MAGED1Q9Y5V3 778 aaPredicted RBP10.37□□□□□ -0.75
HSPG2-206ENST00000439717 TRAV27A0A087WT01 109 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 ARPC4-TTLL3A0A0A6YYG9 625 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 DHRS12A0PJE2 317 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 ZNF99A8MXY4 864 aaPredicted RBP10.36□□□□□ -0.75
HSPG2-206ENST00000439717 PGA4P0DJD7 388 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 PGA3P0DJD8 388 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 ACADSP16219 412 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 CDH2P19022 906 aaPredicted RBP10.36□□□□□ -0.75
HSPG2-206ENST00000439717 FHL1Q13642 323 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 GK3PQ14409 553 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 MELKQ14680 651 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 ACKR1Q16570 336 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 PHYHD1Q5SRE7 291 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 NCMAPQ5T1S8 102 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 ARMC4Q5T2S8 1044 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 FAM205BPQ63HN1 556 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 ALKBH2Q6NS38 261 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 KLHL17Q6TDP4 642 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 ZNF627Q7L945 461 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 MEX3DQ86XN8 651 aaKnown RBP10.36□□□□□ -0.75
HSPG2-206ENST00000439717 WDFY1Q8IWB7 410 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 CCDC36Q8IYA8 594 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 ADGRG5Q8IZF4 528 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 WDR31Q8NA23 367 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 LRRC75AQ8NAA5 344 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 OR52N5Q8NH56 324 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 BCL2L2Q92843 193 aaPredicted RBP10.36□□□□□ -0.75
HSPG2-206ENST00000439717 TMEM204Q9BSN7 226 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 MRPL13Q9BYD1 178 aaKnown RBP10.36□□□□□ -0.75
HSPG2-206ENST00000439717 ULBP2Q9BZM5 246 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 PLEKHF2Q9H8W4 249 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 GLTPQ9NZD2 209 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 SLC7A8Q9UHI5 535 aa10.36□□□□□ -0.75
HSPG2-206ENST00000439717 CACNA1DQ01668 2161 aa10.35□□□□□ -0.75
HSPG2-206ENST00000439717 TCRBV3S1A0A5B6 114 aa10.35□□□□□ -0.75
HSPG2-206ENST00000439717 UNC119BA6NIH7 251 aa10.35□□□□□ -0.75
HSPG2-206ENST00000439717 TNFRSF11BO00300 401 aa10.35□□□□□ -0.75
HSPG2-206ENST00000439717 OR10H3O60404 316 aa10.35□□□□□ -0.75
HSPG2-206ENST00000439717 PTP4A3O75365 173 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms