RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 OR5H2Q8NGV7 314 aa11.26□□□□□ -0.61
TCOF1-205ENST00000439160 OR2T35Q8NGX2 323 aa11.26□□□□□ -0.61
TCOF1-205ENST00000439160 MFSD8Q8NHS3 518 aa11.26□□□□□ -0.61
TCOF1-205ENST00000439160 THOC3Q96J01 351 aaKnown RBP11.26□□□□□ -0.61
TCOF1-205ENST00000439160 HCAR1Q9BXC0 346 aa11.26□□□□□ -0.61
TCOF1-205ENST00000439160 TWSG1Q9GZX9 223 aa11.26□□□□□ -0.61
TCOF1-205ENST00000439160 MT-ATP6P00846 226 aa11.26□□□□□ -0.61
TCOF1-205ENST00000439160 ATP1B1P05026 303 aa11.26□□□□□ -0.61
TCOF1-205ENST00000439160 FOLR1P15328 257 aa11.26□□□□□ -0.61
TCOF1-205ENST00000439160 HTR5AP47898 357 aa11.26□□□□□ -0.61
TCOF1-205ENST00000439160 ACKR1Q16570 336 aa11.26□□□□□ -0.61
TCOF1-205ENST00000439160 ZMAT1Q5H9K5 638 aa11.26□□□□□ -0.61
TCOF1-205ENST00000439160 HBMQ6B0K9 141 aa11.26□□□□□ -0.61
TCOF1-205ENST00000439160 C6orf15Q6UXA7 325 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-205ENST00000439160 ABI3BPQ7Z7G0 1075 aa11.26□□□□□ -0.61
TCOF1-205ENST00000439160 YRDCQ86U90 279 aaKnown RBP11.26□□□□□ -0.61
TCOF1-205ENST00000439160 ELMOD2Q8IZ81 293 aa11.26□□□□□ -0.61
TCOF1-205ENST00000439160 OR2L13Q8N349 312 aa11.26□□□□□ -0.61
TCOF1-205ENST00000439160 ACBD4Q8NC06 268 aa11.26□□□□□ -0.61
TCOF1-205ENST00000439160 TOMM40LQ969M1 308 aa11.26□□□□□ -0.61
TCOF1-205ENST00000439160 CDX2Q99626 313 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-205ENST00000439160 MRI1Q9BV20 369 aa11.26□□□□□ -0.61
TCOF1-205ENST00000439160 PLA2G12AQ9BZM1 189 aa11.26□□□□□ -0.61
TCOF1-205ENST00000439160 HIF3AQ9Y2N7 669 aa11.26□□□□□ -0.61
TCOF1-205ENST00000439160 WIF1Q9Y5W5 379 aa11.26□□□□□ -0.61
TCOF1-205ENST00000439160 ARID2Q68CP9 1835 aa11.26□□□□□ -0.61
TCOF1-205ENST00000439160 BRCA1P38398 1863 aaKnown RBP11.25□□□□□ -0.61
TCOF1-205ENST00000439160 TMEM129A0AVI4 362 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 TMEM212A6NML5 194 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 ZNF736B4DX44 427 aaPredicted RBP11.25□□□□□ -0.61
TCOF1-205ENST00000439160 ARPC1BO15143 372 aaKnown RBP11.25□□□□□ -0.61
TCOF1-205ENST00000439160 SLC43A1O75387 559 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 SOD1P00441 154 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 MT-ND4P03905 459 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 EVI2BP34910 448 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 APLNRP35414 380 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 FASLGP48023 281 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 LIPNQ5VXI9 398 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 KMT5CQ86Y97 462 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 C10orf111Q8N326 155 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 MORN4Q8NDC4 146 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 IL17RDQ8NFM7 739 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 BEST4Q8NFU0 473 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 OR5D18Q8NGL1 313 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 LGALS14Q8TCE9 139 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 PIGQQ9BRB3 760 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 CALHM2Q9HA72 323 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 PLEKHJ1Q9NW61 149 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 FBXO34Q9NWN3 711 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 RDH8Q9NYR8 311 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 EMC3Q9P0I2 261 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 KCNS2Q9ULS6 477 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 GPR55Q9Y2T6 319 aaPredicted RBP11.25□□□□□ -0.61
TCOF1-205ENST00000439160 PAHP00439 452 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 KNG1P01042 644 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 IGHV3-9P01782 118 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 HOXC4P09017 264 aaPredicted RBP11.25□□□□□ -0.61
TCOF1-205ENST00000439160 CHRNB1P11230 501 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 ZNF35P13682 527 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 HTR2BP41595 481 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 RPL27P61353 136 aaKnown RBP11.25□□□□□ -0.61
TCOF1-205ENST00000439160 RPL18Q07020 188 aaKnown RBP11.25□□□□□ -0.61
TCOF1-205ENST00000439160 STEAP3Q658P3 488 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 LANCL3Q6ZV70 420 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 BEST3Q8N1M1 668 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 CLDN22Q8N7P3 220 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 FAM83FQ8NEG4 500 aaPredicted RBP11.25□□□□□ -0.61
TCOF1-205ENST00000439160 BRIX1Q8TDN6 353 aaKnown RBP11.25□□□□□ -0.61
TCOF1-205ENST00000439160 TM9SF4Q92544 642 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 ZNF845Q96IR2 970 aaPredicted RBP11.25□□□□□ -0.61
TCOF1-205ENST00000439160 FER1L6-AS2Q96M78 137 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 NUDT9Q9BW91 350 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 PCED1AQ9H1Q7 454 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 NRIP3Q9NQ35 241 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 OR2S2Q9NQN1 319 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 FSCN3Q9NQT6 498 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 ACOXLQ9NUZ1 547 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 CLEC1BQ9P126 229 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 RCE1Q9Y256 329 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 BOLA1Q9Y3E2 137 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 TRDV1A0A1B0GX56 115 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 SERTM1A2A2V5 107 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 DBHP09172 617 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 LIPCP11150 499 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 PVALBP20472 110 aaPredicted RBP11.25□□□□□ -0.61
TCOF1-205ENST00000439160 MSX1P28360 303 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 CCL11P51671 97 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 SSX6Q7RTT6 188 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 DCXRQ7Z4W1 244 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 CDCA4Q9BXL8 241 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 ARL6Q9H0F7 186 aa11.25□□□□□ -0.61
TCOF1-205ENST00000439160 FAM166BA8MTA8 275 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 P2RY10O00398 339 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 GPX5O75715 221 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 GABRR1P24046 479 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 NXPH1P58417 271 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 ECH1Q13011 328 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 PRTGQ2VWP7 1150 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 C3orf33Q6P1S2 294 aa11.24□□□□□ -0.61
TCOF1-205ENST00000439160 FAM199XQ6PEV8 388 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms