RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 C13orf42A0A1B0GVH6 325 aa12.21□□□□□ -0.45
ACTN1-204ENST00000438964 FITM1A5D6W6 292 aa12.21□□□□□ -0.45
ACTN1-204ENST00000438964 RFPL4AA6NLU0 287 aa12.21□□□□□ -0.45
ACTN1-204ENST00000438964 RFPL4AL1F8VTS6 287 aa12.21□□□□□ -0.45
ACTN1-204ENST00000438964 I3L1I5 382 aaPredicted RBP12.21□□□□□ -0.45
ACTN1-204ENST00000438964 EIF4E2O60573 245 aaKnown RBP12.21□□□□□ -0.45
ACTN1-204ENST00000438964 APOC1P02654 83 aa12.21□□□□□ -0.45
ACTN1-204ENST00000438964 FABP1P07148 127 aa12.21□□□□□ -0.45
ACTN1-204ENST00000438964 C8AP07357 584 aa12.21□□□□□ -0.45
ACTN1-204ENST00000438964 TYRP1P17643 537 aa12.21□□□□□ -0.45
ACTN1-204ENST00000438964 SNTB1Q13884 538 aaKnown RBP12.21□□□□□ -0.45
ACTN1-204ENST00000438964 ALG10BQ5I7T1 473 aa12.21□□□□□ -0.45
ACTN1-204ENST00000438964 EXOSC6Q5RKV6 272 aaKnown RBP12.21□□□□□ -0.45
ACTN1-204ENST00000438964 DCST2Q5T1A1 773 aa12.21□□□□□ -0.45
ACTN1-204ENST00000438964 ARHGAP40Q5TG30 622 aa12.21□□□□□ -0.45
ACTN1-204ENST00000438964 LIPNQ5VXI9 398 aa12.21□□□□□ -0.45
ACTN1-204ENST00000438964 BAIAP2L2Q6UXY1 529 aa12.21□□□□□ -0.45
ACTN1-204ENST00000438964 TMEM64Q6YI46 380 aa12.21□□□□□ -0.45
ACTN1-204ENST00000438964 OR2L13Q8N349 312 aa12.21□□□□□ -0.45
ACTN1-204ENST00000438964 TEX19Q8NA77 164 aa12.21□□□□□ -0.45
ACTN1-204ENST00000438964 ROBO4Q8WZ75 1007 aa12.21□□□□□ -0.45
ACTN1-204ENST00000438964 MIB2Q96AX9 1013 aa12.21□□□□□ -0.45
ACTN1-204ENST00000438964 GAS2L1Q99501 681 aaPredicted RBP12.21□□□□□ -0.45
ACTN1-204ENST00000438964 BCL2L14Q9BZR8 327 aa12.21□□□□□ -0.45
ACTN1-204ENST00000438964 PARP12Q9H0J9 701 aaKnown RBP12.21□□□□□ -0.45
ACTN1-204ENST00000438964 ATG5Q9H1Y0 275 aa12.21□□□□□ -0.45
ACTN1-204ENST00000438964 INPP5EQ9NRR6 644 aa12.21□□□□□ -0.45
ACTN1-204ENST00000438964 RNF186Q9NXI6 227 aa12.21□□□□□ -0.45
ACTN1-204ENST00000438964 NDRG3Q9UGV2 375 aa12.21□□□□□ -0.45
ACTN1-204ENST00000438964 MKL2Q9ULH7 1088 aa12.21□□□□□ -0.45
ACTN1-204ENST00000438964 NOTCH4Q99466 2003 aa12.21□□□□□ -0.46
ACTN1-204ENST00000438964 TBC1D3EA0A087X179 549 aa12.21□□□□□ -0.46
ACTN1-204ENST00000438964 DCTN6O00399 190 aa12.21□□□□□ -0.46
ACTN1-204ENST00000438964 TXNL1O43396 289 aa12.21□□□□□ -0.46
ACTN1-204ENST00000438964 HLA-AP01891 365 aaKnown RBP12.21□□□□□ -0.46
ACTN1-204ENST00000438964 MGMTP16455 207 aa12.21□□□□□ -0.46
ACTN1-204ENST00000438964 GABRA3P34903 492 aa12.21□□□□□ -0.46
ACTN1-204ENST00000438964 ACTC1P68032 377 aa12.21□□□□□ -0.46
ACTN1-204ENST00000438964 ACTA1P68133 377 aa12.21□□□□□ -0.46
ACTN1-204ENST00000438964 FAM53BQ14153 422 aa12.21□□□□□ -0.46
ACTN1-204ENST00000438964 SLC22A6Q4U2R8 563 aa12.21□□□□□ -0.46
ACTN1-204ENST00000438964 C10orf53Q8N6V4 93 aa12.21□□□□□ -0.46
ACTN1-204ENST00000438964 RSRP1Q9BUV0 290 aa12.21□□□□□ -0.46
ACTN1-204ENST00000438964 SELENOIQ9C0D9 397 aa12.21□□□□□ -0.46
ACTN1-204ENST00000438964 HRH4Q9H3N8 390 aa12.21□□□□□ -0.46
ACTN1-204ENST00000438964 BIN3Q9NQY0 253 aa12.21□□□□□ -0.46
ACTN1-204ENST00000438964 FRRS1LQ9P0K9 344 aa12.21□□□□□ -0.46
ACTN1-204ENST00000438964 IGLON5A6NGN9 336 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 TTLL8A6PVC2 850 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 LYPD3O95274 346 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 OR2T7P0C7T2 308 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 RPA2P15927 270 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 VAMP1P23763 118 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 POU3F4P49335 361 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 NKAIN2Q5VXU1 208 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 MOB3CQ70IA8 216 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 ZSCAN1Q8NBB4 408 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 OR2T27Q8NH04 317 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 CALML5Q9NZT1 146 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 TMEM82A0PJX8 343 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 H7C417 338 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 ITGA10O75578 1167 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 CLEC3AO75596 197 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 AQP8O94778 261 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 IFNGP01579 166 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 F13BP05160 661 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 RPLP2P05387 115 aaKnown RBP12.2□□□□□ -0.46
ACTN1-204ENST00000438964 DCNP07585 359 aaKnown RBP12.2□□□□□ -0.46
ACTN1-204ENST00000438964 ID4P47928 161 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 PRMT2P55345 433 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 SLC7A9P82251 487 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 IRF5Q13568 498 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 GAS6Q14393 721 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 GLT8D1Q68CQ7 371 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 STEAP1BQ6NZ63 245 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 C3orf33Q6P1S2 294 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 LEG1Q6P5S2 330 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 SLC29A4Q7RTT9 530 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 SVBPQ8N300 66 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 EIF4E3Q8N5X7 224 aaKnown RBP12.2□□□□□ -0.46
ACTN1-204ENST00000438964 ZNF676Q8N7Q3 588 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 BHLHE23Q8NDY6 225 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 OR5T3Q8NGG3 340 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 MTFP1Q9UDX5 166 aa12.2□□□□□ -0.46
ACTN1-204ENST00000438964 TBC1D3DA0A087WVF3 549 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 TBC1D3IA0A087WXS9 549 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 TBC1D3KA0A087X1G2 549 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 MEX3AA1L020 520 aaKnown RBP12.19□□□□□ -0.46
ACTN1-204ENST00000438964 RNF222A6NCQ9 220 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 TBC1D3BA6NDS4 549 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 TBC1D3FA6NER0 549 aaPredicted RBP12.19□□□□□ -0.46
ACTN1-204ENST00000438964 TBC1D3LB9A6J9 549 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 ITGA5P08648 1049 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 TBC1D3HP0C7X1 549 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 SPI1P17947 270 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 PPT1P50897 306 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 ARFIP1P53367 373 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 TBC1D3GQ6DHY5 549 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 TBC1D3CQ6IPX1 549 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 TBC1D3Q8IZP1 549 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms