RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 RGS16O15492 202 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 FGF16O43320 207 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 ZIC3O60481 467 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 CTNSO60931 367 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 BCAR3O75815 825 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 SRP72O76094 671 aaKnown RBP3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 MPZL1O95297 269 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 OXSR1O95747 527 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 OXTP01178 125 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 SERPINA5P05154 406 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 CDK1P06493 297 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 NGFRP08138 427 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 ZNF35P13682 527 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 MGMTP16455 207 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 CBLP22681 906 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 OPRD1P41143 372 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 HCAR3P49019 387 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 CYB561P49447 251 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 P2RY4P51582 365 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 FUT6P51993 359 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 XGP55808 180 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 RPS6P62753 249 aaKnown RBP3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 NTHL1P78549 312 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 MRPS22P82650 360 aaKnown RBP3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 HOXA4Q00056 320 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 MLLT11Q13015 90 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 OPCMLQ14982 345 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 ZNF672Q499Z4 452 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 LRRC37A5PQ49AS3 106 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 CCDC58Q4VC31 144 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 RFTN2Q52LD8 501 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 SLC35D3Q5M8T2 416 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 CCNJQ5T5M9 372 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 HACD4Q5VWC8 232 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR4C11Q6IEV9 310 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 SPESP1Q6UW49 350 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 LCLAT1Q6UWP7 414 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 HACD2Q6Y1H2 254 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 CERS6Q6ZMG9 384 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 ZNF836Q6ZNA1 936 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 Q6ZRG5 221 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 FAM92BQ6ZTR7 304 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 SHFQ7M4L6 423 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 SSX6Q7RTT6 188 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 TRAPPC5Q8IUR0 188 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 RCOR2Q8IZ40 523 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 CMTM1Q8IZ96 169 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 LINC00518Q8N0U6 118 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 LINC01561Q8N1V8 128 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 PPFIBP2Q8ND30 876 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 LFNGQ8NES3 379 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR5M9Q8NGP3 310 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR6K2Q8NGY2 324 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR5AK3PQ8NH89 298 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 THAP6Q8TBB0 222 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 PIGXQ8TBF5 258 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 MCOLN3Q8TDD5 553 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 APH1BQ8WW43 257 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR8D1Q8WZ84 308 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 ART4Q93070 314 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 EME1Q96AY2 570 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 PPWD1Q96BP3 646 aaKnown RBP3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 S100PBPQ96BU1 408 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 FLYWCH2Q96CP2 140 aaKnown RBP3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 ITCHQ96J02 903 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 ZNF641Q96N77 438 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 ATF6BQ99941 703 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 NIPSNAP1Q9BPW8 284 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 HOPXQ9BPY8 73 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 NIPSNAP3BQ9BS92 247 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 TRIM15Q9C019 465 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 COMMD4Q9H0A8 199 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 GAREM1Q9H706 876 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 SLC25A19Q9HC21 320 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 ABCB9Q9NP78 766 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 FGF20Q9NP95 211 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 ACP6Q9NPH0 428 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 PAK1IP1Q9NWT1 392 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 VNN3Q9NY84 501 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 PURGQ9UJV8 347 aaKnown RBP3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 GUCA1BQ9UMX6 200 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 TFR2Q9UP52 801 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 LAMP3Q9UQV4 416 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 RCL1Q9Y2P8 373 aaKnown RBP3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 SAR1BQ9Y6B6 198 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 PBRM1Q86U86 1689 aa3.13□□□□□ -1.91
HMGB1P12-201ENST00000438594 A0A0A6YYD5 115 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 EFCAB10A6NFE3 127 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 HIDE1A8MVS5 230 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 ERVV-2B6SEH9 535 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 H3BNH8 94 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 J3QLI3 93 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 CCRL2O00421 344 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 SLC31A1O15431 190 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 PI15O43692 258 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 AP2A1O95782 977 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 GUSBP08236 651 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 THRAP10827 490 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 GP1BBP13224 206 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 CD36P16671 472 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms