RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 GCNT6Q5T4J0 391 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 CARD17Q5XLA6 110 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 REP15Q6BDI9 236 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 SHQ1Q6PI26 577 aaKnown RBP6.73□□□□□ -1.33
VPS50-204ENST00000438395 H1FNTQ75WM6 255 aaPredicted RBP6.73□□□□□ -1.33
VPS50-204ENST00000438395 NET1Q7Z628 596 aaPredicted RBP6.73□□□□□ -1.33
VPS50-204ENST00000438395 RANBP3LQ86VV4 465 aaPredicted RBP6.73□□□□□ -1.33
VPS50-204ENST00000438395 EPHX4Q8IUS5 362 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 KDM8Q8N371 416 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 OR6N1Q8NGY5 312 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 CKAP2Q8WWK9 683 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 MAL2Q969L2 176 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 BOD1Q96IK1 185 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 SNX18Q96RF0 628 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 ZNF607Q96SK3 696 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 ULBP2Q9BZM5 246 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 C12orf10Q9HB07 376 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 TMEM27Q9HBJ8 222 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 GPR35Q9HC97 309 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 BCL2L10Q9HD36 194 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 SLC6A13Q9NSD5 602 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 CRNNQ9UBG3 495 aaPredicted RBP6.73□□□□□ -1.33
VPS50-204ENST00000438395 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.73□□□□□ -1.33
VPS50-204ENST00000438395 TESQ9UGI8 421 aaKnown RBP6.73□□□□□ -1.33
VPS50-204ENST00000438395 CORO2BQ9UQ03 480 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 POFUT2Q9Y2G5 429 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 CORINQ9Y5Q5 1042 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 A0A1B0GWA3 101 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 A0A1W2PPW3 197 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 ZNF99A8MXY4 864 aaPredicted RBP6.72□□□□□ -1.33
VPS50-204ENST00000438395 VWC2LB2RUY7 222 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 FTCDNL1E5RQL4 147 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 RPL36A-HNRNPH2H7BZ11 118 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 ERLIN1O75477 346 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 SERPINB7O75635 380 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 OR6A2O95222 327 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 IGKV3-15P01624 115 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 C8BP07358 591 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 CELA3BP08861 270 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 ADRA2AP08913 450 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 ETS2P15036 469 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 RAB6AP20340 208 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 ADMP35318 185 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 P2RY4P51582 365 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 MVDP53602 400 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 GP2P55259 537 aaKnown RBP6.72□□□□□ -1.33
VPS50-204ENST00000438395 SELENOVP59797 346 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 POU3F1Q03052 451 aaPredicted RBP6.72□□□□□ -1.33
VPS50-204ENST00000438395 PMS2P3Q13401 168 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 MAPK11Q15759 364 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 SLC9B1Q4ZJI4 515 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 KRT80Q6KB66 452 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 REEP3Q6NUK4 255 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 ULK3Q6PHR2 472 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 C6orf89Q6UWU4 347 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 ZNF813Q6ZN06 617 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 MDP1Q86V88 176 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 LINC01356Q8N9X3 169 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 ADPRHL1Q8NDY3 354 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 OR9I1Q8NGQ6 314 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 NFKBIDQ8NI38 313 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 KTI12Q96EK9 354 aaPredicted RBP6.72□□□□□ -1.33
VPS50-204ENST00000438395 SLC47A1Q96FL8 570 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 OR2M2Q96R28 347 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 PTDSS2Q9BVG9 487 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 NOX3Q9HBY0 568 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 TCF7L2Q9NQB0 619 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 KLHL14Q9P2G3 628 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 FBXL3Q9UKT7 428 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 ANGPT4Q9Y264 503 aa6.72□□□□□ -1.33
VPS50-204ENST00000438395 A0A087WUJ7 227 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 LRP5LA4QPB2 252 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 EVPLLA8MZ36 301 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 TCF21O43680 179 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 TRAF3IP2O43734 574 aaPredicted RBP6.71□□□□□ -1.34
VPS50-204ENST00000438395 SYNGR3O43761 229 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 STAMBPO95630 424 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 HLA-HP01893 362 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 B4GALT1P15291 398 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 CBLP22681 906 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 AHCYP23526 432 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 SLC6A2P23975 617 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 GIFP27352 417 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 AQP1P29972 269 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 CALCRP30988 508 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 PTDSS1P48651 473 aaKnown RBP6.71□□□□□ -1.34
VPS50-204ENST00000438395 CSNK1A1P48729 337 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 MAGOHP61326 146 aaKnown RBP6.71□□□□□ -1.34
VPS50-204ENST00000438395 CDK6Q00534 326 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 HGFACQ04756 655 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 PUDPQ08623 228 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 CCNIQ14094 377 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 SCARB2Q14108 478 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 FAM91A1Q658Y4 838 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 DHRS4L2Q6PKH6 230 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 SLC2A7Q6PXP3 512 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 RINLQ6ZS11 566 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 LINGO2Q7L985 606 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 GLCCI1Q86VQ1 547 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 LSRQ86X29 649 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms