RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 BRCA1P38398 1863 aaKnown RBP6.13□□□□□ -1.43
CSDE1-205ENST00000438362 ANKRD61A6NGH8 418 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 DUX1O43812 170 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 BRINP1O60477 761 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 GREM1O60565 184 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 GALR3O60755 368 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-205ENST00000438362 FARS2O95363 451 aaKnown RBP6.13□□□□□ -1.43
CSDE1-205ENST00000438362 TPT1P13693 172 aaKnown RBP6.13□□□□□ -1.43
CSDE1-205ENST00000438362 RAB3AP20336 220 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 LIMS1P48059 325 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 RAG2P55895 527 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 VAMP2P63027 116 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 GPNMBQ14956 572 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 TSC22D1Q15714 1073 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 PXDC1Q5TGL8 231 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 YOD1Q5VVQ6 348 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-205ENST00000438362 SIGIRRQ6IA17 410 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 FAM122CQ6P4D5 195 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 TMUB2Q71RG4 321 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 OR2L13Q8N349 312 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 OR5D14Q8NGL3 314 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 OR1J4Q8NGS1 313 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 OR51Q1Q8NH59 317 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 PNPLA2Q96AD5 504 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 ORAI1Q96D31 301 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 SEC22AQ96IW7 307 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 CDC6Q99741 560 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 GPA33Q99795 319 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 ULBP3Q9BZM4 244 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF700Q9H0M5 742 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 SLCO5A1Q9H2Y9 848 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 C19orf25Q9UFG5 118 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-205ENST00000438362 ASCC3Q8N3C0 2202 aaKnown RBP6.13□□□□□ -1.43
CSDE1-205ENST00000438362 LOC100289279A0A1B0GTE1 492 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 H0Y8X5 98 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 H3BML4 177 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 TNFRSF10CO14798 259 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 UTS2O95399 124 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 ARRB1P49407 418 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-205ENST00000438362 DCAF7P61962 342 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 HNRNPKP61978 463 aaKnown RBP eCLIP6.13□□□□□ -1.43
CSDE1-205ENST00000438362 ARL6IP1Q15041 203 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 RAB30Q15771 203 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 FCRL6Q6DN72 434 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 UBE3DQ7Z6J8 389 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 PLXDC1Q8IUK5 500 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 SLC37A2Q8TED4 501 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 HOXB13Q92826 284 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-205ENST00000438362 GCDHQ92947 438 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-205ENST00000438362 PELI1Q96FA3 418 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 TCTN2Q96GX1 697 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 COX14Q96I36 57 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 MAP6Q96JE9 813 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 ELF4Q99607 663 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-205ENST00000438362 PRRG4Q9BZD6 226 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 TSPAN10Q9H1Z9 355 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-205ENST00000438362 SEMA6CQ9H3T2 930 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 B3GAT2Q9NPZ5 323 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 EVA1BQ9NVM1 165 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 MRPS18AQ9NVS2 196 aaKnown RBP6.13□□□□□ -1.43
CSDE1-205ENST00000438362 KLK11Q9UBX7 282 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 SLC17A4Q9Y2C5 497 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 PDCD11Q14690 1871 aaKnown RBP6.13□□□□□ -1.43
CSDE1-205ENST00000438362 PRAMEF25A6NGN4 478 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 H7C417 338 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 HCRTR1O43613 425 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 PMS2P2O95744 297 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 TGM6O95932 706 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 APOC1P02654 83 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 PRKACAP17612 351 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 POU3F3P20264 500 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-205ENST00000438362 HERV-K104P61576 105 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 CSNK2A1P68400 391 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-205ENST00000438362 IFITM2Q01629 132 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 OR7A5Q15622 319 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 GLYATL3Q5SZD4 288 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 FAAP20Q6NZ36 180 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF585AQ6P3V2 769 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 KIRREL2Q6UWL6 708 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 TMEM156Q8N614 296 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 CSNK2A3Q8NEV1 391 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 OR5L2Q8NGL0 311 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 CCL4L1Q8NHW4 92 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 DDIT4LQ96D03 193 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 SENP5Q96HI0 755 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-205ENST00000438362 FAM71F1Q96KD3 344 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-205ENST00000438362 CNTNAP3BQ96NU0 1288 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 TSSK2Q96PF2 358 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 SORCS2Q96PQ0 1159 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 PPP1R3EQ9H7J1 279 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 LRIT1Q9P2V4 623 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 VDAC3Q9Y277 283 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 NEUROG3Q9Y4Z2 214 aa6.13□□□□□ -1.43
CSDE1-205ENST00000438362 DSPPQ9NZW4 1301 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 TRAV36DV7A0A075B6V5 113 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 SNRPGP15A8MWD9 76 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 E9PI62 339 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 M0QYG6 137 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 SCO1O75880 301 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 IGHA1P01876 353 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms