RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 NR0B1P51843 470 aaKnown RBP9.45□□□□□ -0.9
CD44-210ENST00000434472 POLR2HP52434 150 aaKnown RBP9.45□□□□□ -0.9
CD44-210ENST00000434472 GNG2P59768 71 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 PLCXD2Q0VAA5 305 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 SMAD4Q13485 552 aaKnown RBP9.45□□□□□ -0.9
CD44-210ENST00000434472 TDGQ13569 410 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 CBFBQ13951 182 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 SGCBQ16585 318 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 GSG1Q2KHT4 349 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 FDX2Q6P4F2 183 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 STAC2Q6ZMT1 411 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 ZNF227Q86WZ6 799 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 D2HGDHQ8N465 521 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 ZNF676Q8N7Q3 588 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 OR6S1Q8NH40 331 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 C1orf216Q8TAB5 229 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 GPR148Q8TDV2 347 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 ZNF431Q8TF32 576 aaPredicted RBP9.45□□□□□ -0.9
CD44-210ENST00000434472 CCDC74AQ96AQ1 378 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 MIB2Q96AX9 1013 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 HAVCR1Q96D42 359 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 SLC25A38Q96DW6 304 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 SMAD5Q99717 465 aaKnown RBP9.45□□□□□ -0.9
CD44-210ENST00000434472 PHF7Q9BWX1 381 aaPredicted RBP9.45□□□□□ -0.9
CD44-210ENST00000434472 CCDC86Q9H6F5 360 aaKnown RBP9.45□□□□□ -0.9
CD44-210ENST00000434472 LIN7BQ9HAP6 207 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 OR5V1Q9UGF6 321 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 FOXJ3Q9UPW0 622 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 KLHDC2Q9Y2U9 406 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 HSPB11Q9Y547 144 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 MEIKINA0A087WXM9 373 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 IGHV1OR21-1A0A087WYE8 117 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 TVP23AA6NH52 213 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 A6NL46 340 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 OR4C45A6NMZ5 311 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 PRR32B1ATL7 298 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 ACOT7O00154 380 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 KHNYNO15037 678 aaKnown RBP9.45□□□□□ -0.9
CD44-210ENST00000434472 FABP7O15540 132 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 PEX14O75381 377 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 KHDRBS3O75525 346 aaKnown RBP9.45□□□□□ -0.9
CD44-210ENST00000434472 SNAPC5O75971 98 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 SULT1A3P0DMM9 295 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 SULT1A4P0DMN0 295 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 PSMB1P20618 241 aaKnown RBP9.45□□□□□ -0.9
CD44-210ENST00000434472 P2RX1P51575 399 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 RPL27P61353 136 aaKnown RBP9.45□□□□□ -0.9
CD44-210ENST00000434472 TMEM69Q5SWH9 247 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 NKAIN2Q5VXU1 208 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 OLFML2AQ68BL7 652 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 LAMTOR1Q6IAA8 161 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 PWWP2BQ6NUJ5 590 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 PRSS45Q7RTY3 260 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 LRRTM1Q86UE6 522 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 MISPQ8IVT2 679 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 DND1Q8IYX4 353 aaKnown RBP9.45□□□□□ -0.9
CD44-210ENST00000434472 PRR22Q8IZ63 422 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 OR6V1Q8N148 313 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 ZNF687Q8N1G0 1237 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 C9orf62Q8N4C0 152 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 DEFB119Q8N690 84 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 OR1N1Q8NGS0 311 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 OR2G2Q8NGZ5 317 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 OR1L3Q8NH93 324 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 SYNPRQ8TBG9 265 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 STK35Q8TDR2 534 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 THEM6Q8WUY1 208 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 METTL21AQ8WXB1 218 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 OMA1Q96E52 524 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 DCBLD2Q96PD2 775 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 TSSK2Q96PF2 358 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 WWTR1Q9GZV5 400 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 HRASLSQ9HDD0 168 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 ANKRD10Q9NXR5 420 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 FRRS1LQ9P0K9 344 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 SEMA5BQ9P283 1151 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 TMED7-TICAM2A0A0A6YYA0 188 aa9.44□□□□□ -0.9
CD44-210ENST00000434472 A0A1B0GX78 115 aa9.44□□□□□ -0.9
CD44-210ENST00000434472 ANKRD20A5PA0PJZ0 165 aa9.44□□□□□ -0.9
CD44-210ENST00000434472 ANXA2P2A6NMY6 339 aa9.44□□□□□ -0.9
CD44-210ENST00000434472 TTLL8A6PVC2 850 aa9.44□□□□□ -0.9
CD44-210ENST00000434472 A8MVM7 634 aa9.44□□□□□ -0.9
CD44-210ENST00000434472 PSMD9O00233 223 aa9.44□□□□□ -0.9
CD44-210ENST00000434472 ZNF593O00488 134 aaPredicted RBP9.44□□□□□ -0.9
CD44-210ENST00000434472 GPR171O14626 319 aa9.44□□□□□ -0.9
CD44-210ENST00000434472 MBTPS2O43462 519 aa9.44□□□□□ -0.9
CD44-210ENST00000434472 NUDT21O43809 227 aaKnown RBP9.44□□□□□ -0.9
CD44-210ENST00000434472 PRKNO60260 465 aaPredicted RBP9.44□□□□□ -0.9
CD44-210ENST00000434472 PIAS2O75928 621 aa9.44□□□□□ -0.9
CD44-210ENST00000434472 AKR7A3O95154 331 aa9.44□□□□□ -0.9
CD44-210ENST00000434472 OR6A2O95222 327 aa9.44□□□□□ -0.9
CD44-210ENST00000434472 NUDT14O95848 222 aa9.44□□□□□ -0.9
CD44-210ENST00000434472 TGM6O95932 706 aa9.44□□□□□ -0.9
CD44-210ENST00000434472 IGHMP01871 453 aa9.44□□□□□ -0.9
CD44-210ENST00000434472 ANXA2P07355 339 aaKnown RBP9.44□□□□□ -0.9
CD44-210ENST00000434472 CFPP27918 469 aa9.44□□□□□ -0.9
CD44-210ENST00000434472 FAUP35544 74 aaKnown RBP9.44□□□□□ -0.9
CD44-210ENST00000434472 PTH2RP49190 550 aa9.44□□□□□ -0.9
CD44-210ENST00000434472 CCR6P51684 374 aa9.44□□□□□ -0.9
CD44-210ENST00000434472 OR1D5P58170 312 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms