RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 RNF44Q7L0R7 432 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 OR51A4Q8NGJ6 313 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 SLC2A12Q8TD20 617 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 C15orf40Q8WUR7 153 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 IRF7Q92985 503 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 TMEM106AQ96A25 262 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 PCBD2Q9H0N5 130 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 KCNE5Q9UJ90 142 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 WNT6Q9Y6F9 365 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 HEATR5BQ9P2D3 2071 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 A0A0B4J2A0 478 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 PRR32B1ATL7 298 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 AVPR2P30518 371 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 PRKXP51817 358 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 Q499Y3 187 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 FAM220AQ7Z4H9 259 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 SLC35F3Q8IY50 421 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 OR1J4Q8NGS1 313 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 TMED6Q8WW62 240 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 MYADMQ96S97 322 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 FAM117AQ9C073 453 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 SRA1Q9HD15 236 aaKnown RBP10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 OR2S2Q9NQN1 319 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 STEAP1Q9UHE8 339 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 SHPKQ9UHJ6 478 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 CES1P1Q9UKY3 287 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 ARID1AO14497 2285 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 MEX3AA1L020 520 aaKnown RBP10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 RAB19A4D1S5 217 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 LRRC72A6NJI9 287 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 OR52A4PA6NMU1 304 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 DCNP07585 359 aaKnown RBP10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 APEHP13798 732 aaKnown RBP10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 VAMP1P23763 118 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 POU3F4P49335 361 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 ZNF157P51786 506 aaPredicted RBP10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 RAB5BP61020 215 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 SKP1P63208 163 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 PEA15Q15121 130 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 MPPED2Q15777 294 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 ALG10BQ5I7T1 473 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 LIPNQ5VXI9 398 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 ENPP7Q6UWV6 458 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 TMEFF1Q8IYR6 380 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 NRSN1Q8IZ57 195 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 RAB42Q8N4Z0 105 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 OR2L5Q8NG80 312 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 OR2A1Q8NGT9 310 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 HCFC1R1Q9NWW0 138 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 MIOXQ9UGB7 285 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 TNFSF18Q9UNG2 199 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 DENND4AQ7Z401 1863 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 TBC1D3KA0A087X1G2 549 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 TBC1D3BA6NDS4 549 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 TBC1D3FA6NER0 549 aaPredicted RBP10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 TVP23AA6NH52 213 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 ZNF860A6NHJ4 632 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 OR2F2O95006 317 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 PMS2P2O95744 297 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 IFNA4P05014 189 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 NGFRP08138 427 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 SELPP16109 830 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 ZNF28P17035 718 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 PPT1P50897 306 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 NR0B1P51843 470 aaKnown RBP10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 NTHL1P78549 312 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 PRKCZQ05513 592 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 AIMP2Q13155 320 aaKnown RBP10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 DUSP8Q13202 625 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 OR2F1Q13607 317 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 TMEM35AQ53FP2 167 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 DCST2Q5T1A1 773 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 TBC1D3GQ6DHY5 549 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 ACOT7LQ6ZUV0 252 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 NAA40Q86UY6 237 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 GABRG1Q8N1C3 465 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 LRRC25Q8N386 305 aaPredicted RBP10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 POMGNT2Q8NAT1 580 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 FGF13Q92913 245 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 NKD1Q969G9 470 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 ZBTB8AQ96BR9 441 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 ZNF681Q96N22 645 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 UPB1Q9UBR1 384 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 APOBEC3BQ9UH17 382 aaKnown RBP10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 KCNK6Q9Y257 313 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 A0A1B0GWA3 101 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 C5orf51A6NDU8 294 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 ICOSLGO75144 302 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 CTAG2O75638 210 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 SOD2P04179 222 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 SLC7A9P82251 487 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 DHRS2Q13268 280 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 ARHGAP11BQ3KRB8 267 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 DHRS7BQ6IAN0 325 aaPredicted RBP10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 FAM109BQ6ICB4 259 aaPredicted RBP10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 UQCC3Q6UW78 93 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 NRROSQ86YC3 692 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 ARMC10Q8N2F6 343 aa10.54□□□□□ -0.72
HMGCS1-202ENST00000433297 ZNF619Q8N2I2 560 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms