RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 MAPK11Q15759 364 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 CEACAM16Q2WEN9 425 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 MS4A18Q3C1V0 323 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 ELFN2Q5R3F8 820 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 ACSM5Q6NUN0 579 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 NHLRC1Q6VVB1 395 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 ZNF836Q6ZNA1 936 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 LINGO2Q7L985 606 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 TREML1Q86YW5 311 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 C20orf196Q8IYI0 205 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 TMEM123Q8N131 208 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 CLEC4FQ8N1N0 589 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 CADM2Q8N3J6 435 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 SVOPLQ8N434 492 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 C3orf56Q8N813 242 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 ZNF781Q8N8C0 355 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 OR1J2Q8NGS2 313 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 ZNF417Q8TAU3 575 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 MGARPQ8TDB4 240 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 GCDHQ92947 438 aaPredicted RBP7.12□□□□□ -1.27
CDH13-203ENST00000431540 RAB39BQ96DA2 213 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 SLC47A1Q96FL8 570 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 ITCHQ96J02 903 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 OR2M2Q96R28 347 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 ZNF587Q96SQ5 575 aaPredicted RBP7.12□□□□□ -1.27
CDH13-203ENST00000431540 TMEM43Q9BTV4 400 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 PTDSS2Q9BVG9 487 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 SSBP4Q9BWG4 385 aaPredicted RBP7.12□□□□□ -1.27
CDH13-203ENST00000431540 TPT1P8Q9HAU6 139 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 NOX3Q9HBY0 568 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 HIF1ANQ9NWT6 349 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 ZIM2Q9NZV7 527 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 B3GAT1Q9P2W7 334 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 RPS6KB2Q9UBS0 482 aa7.12□□□□□ -1.27
CDH13-203ENST00000431540 ZNF443Q9Y2A4 671 aaPredicted RBP7.12□□□□□ -1.27
CDH13-203ENST00000431540 IGLV3-9A0A075B6K5 115 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 A0A087WUJ7 227 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 A0A096LPE4 126 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 A0A1W2PPZ6 126 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 PRORSD1PA6NEY8 169 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 SMIM23A6NLE4 172 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 HDAC3O15379 428 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 SLC22A3O75751 556 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 SNAP29O95721 258 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 MT-ND5P03915 603 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 GAAP10253 952 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 SAGP10523 405 aaPredicted RBP7.11□□□□□ -1.27
CDH13-203ENST00000431540 ZNF250P15622 560 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 EGR1P18146 543 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 TUBG1P23258 451 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 PPIBP23284 216 aaKnown RBP7.11□□□□□ -1.27
CDH13-203ENST00000431540 FPR2P25090 351 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 RAD52P43351 418 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 RAB1AP62820 205 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 SLC3A1Q07837 685 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 ZP4Q12836 540 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 FOXL1Q12952 345 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 STX3Q13277 289 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 SNTB2Q13425 540 aaKnown RBP7.11□□□□□ -1.27
CDH13-203ENST00000431540 CAMK2DQ13557 499 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 ZNF311Q5JNZ3 666 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 PRR31Q5SQ13 230 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 VHLLQ6RSH7 139 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 UEVLDQ8IX04 471 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 CLIP4Q8N3C7 705 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 MREGQ8N565 214 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.11□□□□□ -1.27
CDH13-203ENST00000431540 CPEB3Q8NE35 698 aaKnown RBP7.11□□□□□ -1.27
CDH13-203ENST00000431540 CLDND2Q8NHS1 167 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 BBS10Q8TAM1 723 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 ZNF519Q8TB69 540 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 NANPQ8TBE9 248 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 PNPT1Q8TCS8 783 aaKnown RBP7.11□□□□□ -1.27
CDH13-203ENST00000431540 ALKBH3Q96Q83 286 aaPredicted RBP7.11□□□□□ -1.27
CDH13-203ENST00000431540 SNX18Q96RF0 628 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 SORT1Q99523 831 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 GPA33Q99795 319 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 BCL2L14Q9BZR8 327 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 LRMDAQ9H2I8 198 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 METTL17Q9H7H0 456 aaPredicted RBP7.11□□□□□ -1.27
CDH13-203ENST00000431540 A4GALTQ9NPC4 353 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 TUBG2Q9NRH3 451 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 THAP1Q9NVV9 213 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 RLIMQ9NVW2 624 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 MRPL39Q9NYK5 338 aaKnown RBP7.11□□□□□ -1.27
CDH13-203ENST00000431540 CGGBP1Q9UFW8 167 aaPredicted RBP7.11□□□□□ -1.27
CDH13-203ENST00000431540 POFUT2Q9Y2G5 429 aa7.11□□□□□ -1.27
CDH13-203ENST00000431540 A0A0G2JMP0 313 aa7.1□□□□□ -1.27
CDH13-203ENST00000431540 A0A0X1KG70 313 aa7.1□□□□□ -1.27
CDH13-203ENST00000431540 HTR3EA5X5Y0 456 aa7.1□□□□□ -1.27
CDH13-203ENST00000431540 ZNF726A6NNF4 738 aa7.1□□□□□ -1.27
CDH13-203ENST00000431540 POM121CA8CG34 1229 aa7.1□□□□□ -1.27
CDH13-203ENST00000431540 H3BSA7 217 aa7.1□□□□□ -1.27
CDH13-203ENST00000431540 TRAF3IP2O43734 574 aaPredicted RBP7.1□□□□□ -1.27
CDH13-203ENST00000431540 ITM2AO43736 263 aa7.1□□□□□ -1.27
CDH13-203ENST00000431540 FMO6PO60774 539 aa7.1□□□□□ -1.27
CDH13-203ENST00000431540 SPAG7O75391 227 aa7.1□□□□□ -1.27
CDH13-203ENST00000431540 VENTXO95231 258 aa7.1□□□□□ -1.27
CDH13-203ENST00000431540 FARS2O95363 451 aaKnown RBP7.1□□□□□ -1.27
CDH13-203ENST00000431540 ANP32DO95626 131 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms