RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 ASAH2BP0C7U1 165 aa10.86□□□□□ -0.67
SMPD4-204ENST00000430682 COX4I1P13073 169 aa10.86□□□□□ -0.67
SMPD4-204ENST00000430682 IFNGR1P15260 489 aa10.86□□□□□ -0.67
SMPD4-204ENST00000430682 FUT1P19526 365 aa10.86□□□□□ -0.67
SMPD4-204ENST00000430682 AHCYP23526 432 aa10.86□□□□□ -0.67
SMPD4-204ENST00000430682 PCSK6P29122 969 aa10.86□□□□□ -0.67
SMPD4-204ENST00000430682 APOBEC3AP31941 199 aaPredicted RBP10.86□□□□□ -0.67
SMPD4-204ENST00000430682 KDELR2P33947 212 aa10.86□□□□□ -0.67
SMPD4-204ENST00000430682 IDH3GP51553 393 aaPredicted RBP10.86□□□□□ -0.67
SMPD4-204ENST00000430682 SH3BGRP55822 239 aaPredicted RBP10.86□□□□□ -0.67
SMPD4-204ENST00000430682 BIDP55957 195 aa10.86□□□□□ -0.67
SMPD4-204ENST00000430682 ZP4Q12836 540 aa10.86□□□□□ -0.67
SMPD4-204ENST00000430682 MELKQ14680 651 aa10.86□□□□□ -0.67
SMPD4-204ENST00000430682 MSMPQ1L6U9 139 aa10.86□□□□□ -0.67
SMPD4-204ENST00000430682 CYBRD1Q53TN4 286 aa10.86□□□□□ -0.67
SMPD4-204ENST00000430682 C8orf82Q6P1X6 216 aaPredicted RBP10.86□□□□□ -0.67
SMPD4-204ENST00000430682 TTC33Q6PID6 262 aaPredicted RBP10.86□□□□□ -0.67
SMPD4-204ENST00000430682 MDP1Q86V88 176 aa10.86□□□□□ -0.67
SMPD4-204ENST00000430682 NANOS1Q8WY41 292 aaKnown RBP10.86□□□□□ -0.67
SMPD4-204ENST00000430682 TMEM54Q969K7 222 aa10.86□□□□□ -0.67
SMPD4-204ENST00000430682 FBXO17Q96EF6 278 aa10.86□□□□□ -0.67
SMPD4-204ENST00000430682 MS4A3Q96HJ5 214 aa10.86□□□□□ -0.67
SMPD4-204ENST00000430682 LRR1Q96L50 414 aa10.86□□□□□ -0.67
SMPD4-204ENST00000430682 FKRPQ9H9S5 495 aa10.86□□□□□ -0.67
SMPD4-204ENST00000430682 RIMS3Q9UJD0 308 aa10.86□□□□□ -0.67
SMPD4-204ENST00000430682 SNX13Q9Y5W8 968 aa10.86□□□□□ -0.67
SMPD4-204ENST00000430682 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.86□□□□□ -0.677e-7■■■□□ 15.2
SMPD4-204ENST00000430682 IGFBP1P08833 259 aaPredicted RBP10.85□□□□□ -0.67
SMPD4-204ENST00000430682 PATE4P0C8F1 98 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 HOXB1P14653 301 aaPredicted RBP10.85□□□□□ -0.67
SMPD4-204ENST00000430682 CBR1P16152 277 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 SEC24CP53992 1094 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 UBE2NP61088 152 aaKnown RBP10.85□□□□□ -0.67
SMPD4-204ENST00000430682 RUNX1T1Q06455 604 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 MAPRE2Q15555 327 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 ADIPOQQ15848 244 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 ETFDHQ16134 617 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 LRRC23Q53EV4 343 aaPredicted RBP10.85□□□□□ -0.67
SMPD4-204ENST00000430682 C1QTNF12Q5T7M4 302 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 LRFN4Q6PJG9 635 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 DEF8Q6ZN54 512 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 SLC35D2Q76EJ3 337 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 ZNF627Q7L945 461 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 MEX3DQ86XN8 651 aaKnown RBP10.85□□□□□ -0.67
SMPD4-204ENST00000430682 PRIMA1Q86XR5 153 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 MICU2Q8IYU8 434 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 DEPDC4Q8N2C3 294 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 ZNF525Q8N782 197 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 OR10H5Q8NGA6 315 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 PROX1Q92786 737 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 MPP4Q96JB8 637 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 HS6ST2Q96MM7 605 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 SH3GL1Q99961 368 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 KATNB1Q9BVA0 655 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 NANSQ9NR45 359 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 CA10Q9NS85 328 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 A4GNTQ9UNA3 340 aa10.85□□□□□ -0.67
SMPD4-204ENST00000430682 IGHV2OR16-5A0A0B4J2B6 119 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 TMEM129A0AVI4 362 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 H7C417 338 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 B4GALT1P15291 398 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 THBS4P35443 961 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 PIGFQ07326 219 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 C3orf36Q3SXR2 165 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 ERICH5Q6P6B1 374 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 VHLLQ6RSH7 139 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 ZNF813Q6ZN06 617 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 TSEN54Q7Z6J9 526 aaKnown RBP10.84□□□□□ -0.67
SMPD4-204ENST00000430682 VTCN1Q7Z7D3 282 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 SKA3Q8IX90 412 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 FAM169BQ8N8A8 192 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 ANKS4BQ8N8V4 417 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 PCYOX1LQ8NBM8 494 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 OR2T12Q8NG77 320 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 OR6N1Q8NGY5 312 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 MOSPD2Q8NHP6 518 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 RP9Q8TA86 221 aaKnown RBP10.84□□□□□ -0.67
SMPD4-204ENST00000430682 SORCS2Q96PQ0 1159 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 SLC19A3Q9BZV2 496 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 MED4Q9NPJ6 270 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 GID8Q9NWU2 228 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 ZNF229Q9UJW7 825 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 ADAM21Q9UKJ8 722 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 BAG5Q9UL15 447 aa10.84□□□□□ -0.67
SMPD4-204ENST00000430682 ELOVL7A1L3X0 281 aa10.83□□□□□ -0.68
SMPD4-204ENST00000430682 ZNF726A6NNF4 738 aa10.83□□□□□ -0.68
SMPD4-204ENST00000430682 FAM171A2A8MVW0 826 aa10.83□□□□□ -0.68
SMPD4-204ENST00000430682 BLOC1S5-TXNDC5H3BN57 136 aa10.83□□□□□ -0.68
SMPD4-204ENST00000430682 J3KTA2 159 aa10.83□□□□□ -0.68
SMPD4-204ENST00000430682 FFAR1O14842 300 aa10.83□□□□□ -0.68
SMPD4-204ENST00000430682 SLC22A2O15244 555 aa10.83□□□□□ -0.68
SMPD4-204ENST00000430682 AKAP8O43823 692 aaKnown RBP10.83□□□□□ -0.68
SMPD4-204ENST00000430682 OR5F1O95221 314 aa10.83□□□□□ -0.68
SMPD4-204ENST00000430682 CRYAAP02489 173 aa10.83□□□□□ -0.68
SMPD4-204ENST00000430682 MT-ND1P03886 318 aa10.83□□□□□ -0.68
SMPD4-204ENST00000430682 F13BP05160 661 aa10.83□□□□□ -0.68
SMPD4-204ENST00000430682 OR4A8P0C604 315 aa10.83□□□□□ -0.68
SMPD4-204ENST00000430682 TSPAN19P0C672 248 aa10.83□□□□□ -0.68
SMPD4-204ENST00000430682 PGA4P0DJD7 388 aa10.83□□□□□ -0.68
SMPD4-204ENST00000430682 PGA3P0DJD8 388 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms