RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 CORO2BQ9UQ03 480 aa10.18□□□□□ -0.78
HDAC4-202ENST00000430200 NDUFAF1Q9Y375 327 aa10.18□□□□□ -0.78
HDAC4-202ENST00000430200 PRORSD1PA6NEY8 169 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 EVPLLA8MZ36 301 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 LYNX1G3V0Z9 82 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 hCG_2039718K7EN88 272 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 M0QX08 132 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 ANGPT2O15123 496 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 FMO6PO60774 539 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 SHOX2O60902 331 aaPredicted RBP10.17□□□□□ -0.78
HDAC4-202ENST00000430200 PDE5AO76074 875 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 LYNX1P0DP58 116 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 IFNGR1P15260 489 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 NR4A2P43354 598 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 PPOXP50336 477 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 UGT2B15P54855 530 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 BIDP55957 195 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 LSM11P83369 360 aaKnown RBP eCLIP10.17□□□□□ -0.78
HDAC4-202ENST00000430200 CHRNB3Q05901 458 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 RUNX1T1Q06455 604 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 PMS2P3Q13401 168 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 TRMT5Q32P41 509 aaKnown RBP10.17□□□□□ -0.78
HDAC4-202ENST00000430200 SWT1Q5T5J6 900 aaKnown RBP10.17□□□□□ -0.78
HDAC4-202ENST00000430200 C1QTNF12Q5T7M4 302 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 ZNF613Q6PF04 617 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 ZNF627Q7L945 461 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 RANBP3LQ86VV4 465 aaPredicted RBP10.17□□□□□ -0.78
HDAC4-202ENST00000430200 CALHM3Q86XJ0 350 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 PAQR4Q8N4S7 273 aaPredicted RBP10.17□□□□□ -0.78
HDAC4-202ENST00000430200 ANKK1Q8NFD2 765 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 PFN4Q8NHR9 129 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 MSI2Q96DH6 328 aaKnown RBP10.17□□□□□ -0.78
HDAC4-202ENST00000430200 FOXN4Q96NZ1 517 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 ZNF317Q96PQ6 595 aaPredicted RBP10.17□□□□□ -0.78
HDAC4-202ENST00000430200 DOK1Q99704 481 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 VRK1Q99986 396 aaPredicted RBP10.17□□□□□ -0.78
HDAC4-202ENST00000430200 PCDHAC1Q9H158 963 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 ZNF442Q9H7R0 627 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 TMEM27Q9HBJ8 222 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 ZNF446Q9NWS9 450 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 TAS2R5Q9NYW4 299 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 CORINQ9Y5Q5 1042 aa10.17□□□□□ -0.78
HDAC4-202ENST00000430200 NBEAL1Q6ZS30 2694 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 LRP5LA4QPB2 252 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 PIP5K1CO60331 668 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 CH25HO95992 272 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 FUT1P19526 365 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 USF1P22415 310 aaPredicted RBP10.16□□□□□ -0.78
HDAC4-202ENST00000430200 CAPZA2P47755 286 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 DSCR9P59020 149 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 PIGFQ07326 219 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 RBBP4Q09028 425 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 MAD2L1BPQ15013 274 aaPredicted RBP10.16□□□□□ -0.78
HDAC4-202ENST00000430200 TRIP10Q15642 601 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 CARTPTQ16568 116 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 VMACQ2NL98 169 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 TMEM255AQ5JRV8 349 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 REP15Q6BDI9 236 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 NANOGP8Q6NSW7 305 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 ZNF813Q6ZN06 617 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 LRP11Q86VZ4 500 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 NKAIN4Q8IVV8 208 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 C10orf53Q8N6V4 93 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 OR5J2Q8NH18 312 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 TMEM54Q969K7 222 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 FOXB1Q99853 325 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 ASPNQ9BXN1 380 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 MRPL37Q9BZE1 423 aaKnown RBP10.16□□□□□ -0.78
HDAC4-202ENST00000430200 ULBP2Q9BZM5 246 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 TPK1Q9H3S4 243 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 VIPAS39Q9H9C1 493 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 NANOGQ9H9S0 305 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 C20orf141Q9NUB4 165 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 NOX1Q9Y5S8 564 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 PMF1-BGLAPU3KQ54 211 aa10.16□□□□□ -0.78
HDAC4-202ENST00000430200 B9A039 149 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 SERPINB7O75635 380 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 NCR1O76036 304 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 CSF3P09919 207 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 ASAH2BP0C7U1 165 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 PGA4P0DJD7 388 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 PGA3P0DJD8 388 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 ADORA3P0DMS8 318 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 CD79AP11912 226 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 ZNF35P13682 527 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 NPR2P20594 1047 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 AHCYP23526 432 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 GIPRP48546 466 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 PDLIM4P50479 330 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 HNRNPA0Q13151 305 aaKnown RBP10.15□□□□□ -0.78
HDAC4-202ENST00000430200 GSG1Q2KHT4 349 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 LRFN4Q6PJG9 635 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 SLC35D2Q76EJ3 337 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 CCDC80Q76M96 950 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 SPATA21Q7Z572 469 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 PXKQ7Z7A4 578 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 CARM1Q86X55 608 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 SKA3Q8IX90 412 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 TMEM255BQ8WV15 326 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 PROX1Q92786 737 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms