RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ACTG2P63267 376 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 FAM53BQ14153 422 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 NFATC4Q14934 902 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 LRRC69Q6ZNQ3 347 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 ARIH2OSQ8N7S6 290 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 Q8NFD4 153 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 OR5AK2Q8NH90 309 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 ZPLD1Q8TCW7 415 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 OR2A5Q96R48 311 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 PRSS27Q9BQR3 290 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 ALG12Q9BV10 488 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 SARGQ9BW04 601 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 C20orf85Q9H1P6 137 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 KCNK15Q9H427 330 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 EXO5Q9H790 373 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 GPN1Q9HCN4 374 aaPredicted RBP7.38□□□□□ -1.23
HPS4-205ENST00000429411 FLRT3Q9NZU0 649 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 KLHL9Q9P2J3 617 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 NCDNQ9UBB6 729 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 SLC17A4Q9Y2C5 497 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 MAB21L2Q9Y586 359 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 PCDHGA1Q9Y5H4 931 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 V9GY05 133 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 DMDP11532 3685 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 A0A087WV48 116 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 CXorf51AA0A1B0GTR3 108 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 A0A1B0GVI7 797 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 BHLHE40O14503 412 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 PDCD5O14737 125 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 SPDEFO95238 335 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 COL9A1P20849 921 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 CXCR1P25024 350 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 TAGLN2P37802 199 aaKnown RBP7.37□□□□□ -1.23
HPS4-205ENST00000429411 OR1D4P47884 311 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 GAS1P54826 345 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 KIAA1024LP59773 190 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 GRK1Q15835 563 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 ALG10Q5BKT4 473 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 BEX5Q5H9J7 111 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 ULK3Q6PHR2 472 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 TTLL10Q6ZVT0 673 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 USP53Q70EK8 1073 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 ZNF550Q7Z398 422 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 TMPRSS9Q7Z410 1059 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 OR2L13Q8N349 312 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 ZNF454Q8N9F8 522 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 RCBTB1Q8NDN9 531 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 DUSP18Q8NEJ0 188 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 METTL21AQ8WXB1 218 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 TMEM106AQ96A25 262 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 GTPBP2Q9BX10 602 aaKnown RBP7.37□□□□□ -1.23
HPS4-205ENST00000429411 ATG5Q9H1Y0 275 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 SYT4Q9H2B2 425 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 ANKRD19PQ9H560 264 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 FAM60AQ9NP50 221 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 ISYNA1Q9NPH2 558 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 C14orf105Q9NVL8 296 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 SESN1Q9Y6P5 492 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 ZNF593O00488 134 aaPredicted RBP7.37□□□□□ -1.23
HPS4-205ENST00000429411 HCRTR1O43613 425 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 RBBP9O75884 186 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 SLC22A5O76082 557 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 IGHA1P01876 353 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 ANKRD34CP0C6C1 535 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 TFPIP10646 304 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 ERGP11308 486 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 RNH1P13489 461 aaKnown RBP7.37□□□□□ -1.23
HPS4-205ENST00000429411 ZNF250P15622 560 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 ART1P52961 327 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 EEF1A1P68104 462 aaKnown RBP7.37□□□□□ -1.23
HPS4-205ENST00000429411 SGCAQ16586 387 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 NKPD1Q17RQ9 610 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 TCTE1Q5JU00 501 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 PXDC1Q5TGL8 231 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 GARNL3Q5VVW2 1013 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 ZNF425Q6IV72 752 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 LRFN4Q6PJG9 635 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 LRRN1Q6UXK5 716 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 BEND4Q6ZU67 534 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 CREB3L2Q70SY1 520 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 NDUFAF7Q7L592 441 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 TPRA1Q86W33 373 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 RNF113BQ8IZP6 322 aaKnown RBP7.37□□□□□ -1.23
HPS4-205ENST00000429411 OR51D1Q8NGF3 324 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 POC1BQ8TC44 478 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 BRIX1Q8TDN6 353 aaKnown RBP7.37□□□□□ -1.23
HPS4-205ENST00000429411 TTC9Q92623 222 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 MS4A3Q96HJ5 214 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 RNF170Q96K19 258 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 ZNF350Q9GZX5 532 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 GLTPQ9NZD2 209 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 COPS3Q9UNS2 423 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 EXOGQ9Y2C4 368 aaKnown RBP7.37□□□□□ -1.23
HPS4-205ENST00000429411 DTX4Q9Y2E6 619 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 C2orf72A6NCS6 295 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 GPR89AB7ZAQ6 455 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 CREBL2O60519 120 aaPredicted RBP7.37□□□□□ -1.23
HPS4-205ENST00000429411 TACSTD2P09758 323 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 GPR89BP0CG08 455 aa7.37□□□□□ -1.23
HPS4-205ENST00000429411 PSMB1P20618 241 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms