RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 TMEM129A0AVI4 362 aa14.64□□□□□ -0.07
PKP4-205ENST00000426248 KRT33AO76009 404 aa14.64□□□□□ -0.07
PKP4-205ENST00000426248 CSN2P05814 226 aa14.64□□□□□ -0.07
PKP4-205ENST00000426248 CNR1P21554 472 aa14.64□□□□□ -0.07
PKP4-205ENST00000426248 OR1D4P47884 311 aa14.64□□□□□ -0.07
PKP4-205ENST00000426248 OR2B11Q5JQS5 317 aa14.64□□□□□ -0.07
PKP4-205ENST00000426248 LRRTM1Q86UE6 522 aa14.64□□□□□ -0.07
PKP4-205ENST00000426248 OR51M1Q9H341 326 aa14.64□□□□□ -0.07
PKP4-205ENST00000426248 ISG20L2Q9H9L3 353 aaKnown RBP14.64□□□□□ -0.07
PKP4-205ENST00000426248 COL4A4P53420 1690 aaPredicted RBP14.64□□□□□ -0.07
PKP4-205ENST00000426248 ROS1P08922 2347 aa14.64□□□□□ -0.07
PKP4-205ENST00000426248 PLSCR5A0PG75 271 aa14.64□□□□□ -0.07
PKP4-205ENST00000426248 RNASET2O00584 256 aaKnown RBP14.64□□□□□ -0.07
PKP4-205ENST00000426248 SELENOFO60613 162 aa14.64□□□□□ -0.07
PKP4-205ENST00000426248 PIAS2O75928 621 aa14.64□□□□□ -0.07
PKP4-205ENST00000426248 LIMS3P0CW19 117 aa14.64□□□□□ -0.07
PKP4-205ENST00000426248 LIMS4P0CW20 117 aa14.64□□□□□ -0.07
PKP4-205ENST00000426248 CRYBA2P53672 197 aa14.64□□□□□ -0.07
PKP4-205ENST00000426248 ADAM5Q6NVV9 412 aa14.64□□□□□ -0.07
PKP4-205ENST00000426248 C1orf210Q8IVY1 113 aa14.64□□□□□ -0.07
PKP4-205ENST00000426248 OR52N2Q8NGI0 321 aa14.64□□□□□ -0.07
PKP4-205ENST00000426248 OR1S2Q8NGQ3 325 aa14.64□□□□□ -0.07
PKP4-205ENST00000426248 MS4A4EQ96PG1 132 aa14.64□□□□□ -0.07
PKP4-205ENST00000426248 POLDIP3Q9BY77 421 aaKnown RBP14.64□□□□□ -0.07
PKP4-205ENST00000426248 CCDC88CQ9P219 2028 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 PTH2RP49190 550 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 LSM11P83369 360 aaKnown RBP eCLIP14.63□□□□□ -0.071e-13■■□□□ 13.2
PKP4-205ENST00000426248 GLT8D1Q68CQ7 371 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 FAM71E1Q6IPT2 247 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 NUP43Q8NFH3 380 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 OR13C5Q8NGS8 318 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 ELP5Q8TE02 316 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 RBM14Q96PK6 669 aaKnown RBP14.63□□□□□ -0.07
PKP4-205ENST00000426248 HRH4Q9H3N8 390 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 MPTX1A8MV57 137 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 OCLNQ16625 522 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 ZNF660Q6AZW8 331 aaPredicted RBP14.63□□□□□ -0.07
PKP4-205ENST00000426248 RCBTB1Q8NDN9 531 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 OR10R2Q8NGX6 335 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 OR4Q3Q8NH05 313 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 OR52I2Q8NH67 350 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 DUSP19Q8WTR2 217 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 ZNF75AQ96N20 296 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 OR8D2Q9GZM6 311 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 HRASLSQ9HDD0 168 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 OR2S2Q9NQN1 319 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 HIST1H2ABP04908 130 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 LIPCP11150 499 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 PRKAR1BP31321 381 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 WNT3P56703 355 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 NXPH1P58417 271 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 RAE1P78406 368 aaKnown RBP14.63□□□□□ -0.07
PKP4-205ENST00000426248 TMEM69Q5SWH9 247 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 RPTNQ6XPR3 784 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 HIST3H2AQ7L7L0 130 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 LRRC25Q8N386 305 aaPredicted RBP14.63□□□□□ -0.07
PKP4-205ENST00000426248 HIST1H2ACQ93077 130 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 TMEM19Q96HH6 336 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 SEC22AQ96IW7 307 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 ALG8Q9BVK2 526 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 PRTFDC1Q9NRG1 225 aa14.63□□□□□ -0.07
PKP4-205ENST00000426248 A0A1W2PR48 441 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 ANKRD61A6NGH8 418 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 PRAMEF25A6NGN4 478 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 UBBP0CG47 229 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 UBCP0CG48 685 aaKnown RBP14.62□□□□□ -0.07
PKP4-205ENST00000426248 RNH1P13489 461 aaKnown RBP14.62□□□□□ -0.07
PKP4-205ENST00000426248 BSGP35613 385 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 PI4KAP42356 2102 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 CCR9P51686 369 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 RIPPLY1Q0D2K3 151 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 FAM76BQ5HYJ3 339 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 ACER2Q5QJU3 275 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 SEZ6L2Q6UXD5 910 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 OR4D9Q8NGE8 314 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 RHBDD1Q8TEB9 315 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 FAM46AQ96IP4 442 aaKnown RBP14.62□□□□□ -0.07
PKP4-205ENST00000426248 SLC25A32Q9H2D1 315 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 PIGMQ9H3S5 423 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 SEMA6CQ9H3T2 930 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 CXorf36Q9H7Y0 433 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 P2RX2Q9UBL9 471 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 ING1Q9UK53 422 aaPredicted RBP14.62□□□□□ -0.07
PKP4-205ENST00000426248 ZC3H12DA2A288 527 aaKnown RBP14.62□□□□□ -0.07
PKP4-205ENST00000426248 PATE3B3GLJ2 98 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 HMGN2P05204 90 aaKnown RBP14.62□□□□□ -0.07
PKP4-205ENST00000426248 IFNGR1P15260 489 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 MMP11P24347 488 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 IFNGR2P38484 337 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 KHKP50053 298 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 PSMD4P55036 377 aaKnown RBP14.62□□□□□ -0.07
PKP4-205ENST00000426248 FBXO42Q6P3S6 717 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 MSANTD1Q6ZTZ1 278 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 SLC29A4Q7RTT9 530 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 DGAT2Q96PD7 388 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 SERINC2Q96SA4 455 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 MEPEQ9NQ76 525 aaPredicted RBP14.62□□□□□ -0.07
PKP4-205ENST00000426248 SDHAF3Q9NRP4 125 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 ASIC5Q9NY37 505 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 KLHL9Q9P2J3 617 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms