RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 TMEM19Q96HH6 336 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 PKNOX2Q96KN3 472 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 OR2M2Q96R28 347 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 ZNF607Q96SK3 696 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 ZNF587Q96SQ5 575 aaPredicted RBP10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 FOXB1Q99853 325 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 SYT3Q9BQG1 590 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 MRPL37Q9BZE1 423 aaKnown RBP10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 CENPHQ9H3R5 247 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 CDH20Q9HBT6 801 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 SSU72Q9NP77 194 aaKnown RBP10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 HEATR1Q9H583 2144 aaKnown RBP10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 IQCMA0A1B0GVH7 501 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 FTCDNL1E5RQL4 147 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 HDAC3O15379 428 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 MGRN1O60291 552 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 SERPINB7O75635 380 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 MPZL1O95297 269 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 HIST1H2ABP04908 130 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 OR8G3PP0DMU2 310 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 ETS2P15036 469 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 CDKN2CP42773 168 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 ALDH3B1P43353 468 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 HILS1P60008 231 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 PLAURQ03405 335 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 SLC3A1Q07837 685 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 FOXL1Q12952 345 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 HFEQ30201 348 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 ELFN2Q5R3F8 820 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 DCAF12L2Q5VW00 463 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 FAM91A1Q658Y4 838 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 HIST3H2AQ7L7L0 130 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 LSMEM1Q8N8F7 131 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 SYNPRQ8TBG9 265 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 HIST1H2ACQ93077 130 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 NELFAQ9H3P2 528 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 BCL2L10Q9HD36 194 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 HINT3Q9NQE9 182 aaKnown RBP10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 ZNF275Q9NSD4 429 aaPredicted RBP10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 B3GNT2Q9NY97 397 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 TAAR3PQ9P1P4 343 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 EIF3KQ9UBQ5 218 aaKnown RBP10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 DSPPQ9NZW4 1301 aa10.55□□□□□ -0.72
HLA-DQB3-203ENST00000425319 A0A087WUJ7 227 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 CLDN25C9JDP6 229 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 HPXP02790 462 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 SERPINA5P05154 406 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 LCKP06239 509 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 ZNF35P13682 527 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 PRG2P13727 222 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 CBLP22681 906 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 PPIBP23284 216 aaKnown RBP10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 PRKAR1BP31321 381 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 GIPRP48546 466 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 CSNK1A1P48729 337 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 SEC24CP53992 1094 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 KLF3P57682 345 aaPredicted RBP10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 RBBP4Q09028 425 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 FADDQ13158 208 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 C6orf89Q6UWU4 347 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 PXKQ7Z7A4 578 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 RANBP3LQ86VV4 465 aaPredicted RBP10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 ST7LQ8TDW4 575 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 TAAR8Q969N4 342 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 GPA33Q99795 319 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 EMC6Q9BV81 110 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 TMEM109Q9BVC6 243 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 BCL2L14Q9BZR8 327 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 ZNF665Q9H7R5 613 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 SEC61A2Q9H9S3 476 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 PNPOQ9NVS9 261 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 THAP1Q9NVV9 213 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 ZIM2Q9NZV7 527 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 GPR45Q9Y5Y3 372 aa10.54□□□□□ -0.72
HLA-DQB3-203ENST00000425319 PLSCR5A0PG75 271 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 CLIC1O00299 241 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 UBDO15205 165 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 RGS9O75916 674 aaPredicted RBP10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 SEC14L2O76054 403 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 MT-ATP6P00846 226 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 ZNF14P17017 642 aaPredicted RBP10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 BGNP21810 368 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 GCH1P30793 250 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 POLR2JP52435 117 aaKnown RBP10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 STX1BP61266 288 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 MVKQ03426 396 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 EGR4Q05215 589 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 PUDPQ08623 228 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 RAB39AQ14964 217 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 RGNQ15493 299 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 TBC1D28Q2M2D7 210 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 SLC36A2Q495M3 483 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 RPS26P11Q5JNZ5 115 aaPredicted RBP10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 SHISA2Q6UWI4 295 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 ZNF627Q7L945 461 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 C1orf174Q8IYL3 243 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 GOLGA6L1Q8N7Z2 621 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 SEMA6DQ8NFY4 1073 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 ZNF519Q8TB69 540 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 TEX37Q96LM6 180 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms