RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 MRPL19P49406 292 aaKnown RBP12.84□□□□□ -0.35
ATG4B-209ENST00000425239 COMPP49747 757 aaPredicted RBP12.84□□□□□ -0.35
ATG4B-209ENST00000425239 TMEM33P57088 247 aa12.84□□□□□ -0.35
ATG4B-209ENST00000425239 RAB1AP62820 205 aa12.84□□□□□ -0.35
ATG4B-209ENST00000425239 RUNX1T1Q06455 604 aa12.84□□□□□ -0.35
ATG4B-209ENST00000425239 ALG10BQ5I7T1 473 aa12.84□□□□□ -0.35
ATG4B-209ENST00000425239 CEP85LQ5SZL2 805 aa12.84□□□□□ -0.35
ATG4B-209ENST00000425239 CARD17Q5XLA6 110 aa12.84□□□□□ -0.35
ATG4B-209ENST00000425239 NXNQ6DKJ4 435 aa12.84□□□□□ -0.35
ATG4B-209ENST00000425239 ZNF813Q6ZN06 617 aa12.84□□□□□ -0.35
ATG4B-209ENST00000425239 RINLQ6ZS11 566 aa12.84□□□□□ -0.35
ATG4B-209ENST00000425239 UEVLDQ8IX04 471 aa12.84□□□□□ -0.35
ATG4B-209ENST00000425239 SKA3Q8IX90 412 aa12.84□□□□□ -0.35
ATG4B-209ENST00000425239 SCAIQ8N9R8 606 aa12.84□□□□□ -0.35
ATG4B-209ENST00000425239 RDH5Q92781 318 aa12.84□□□□□ -0.35
ATG4B-209ENST00000425239 TMEM186Q96B77 213 aa12.84□□□□□ -0.35
ATG4B-209ENST00000425239 PAIP2Q9BPZ3 127 aaKnown RBP12.84□□□□□ -0.35
ATG4B-209ENST00000425239 SYT3Q9BQG1 590 aa12.84□□□□□ -0.35
ATG4B-209ENST00000425239 IKZF5Q9H5V7 419 aa12.84□□□□□ -0.35
ATG4B-209ENST00000425239 DENND2DQ9H6A0 471 aaPredicted RBP12.84□□□□□ -0.35
ATG4B-209ENST00000425239 HIF1ANQ9NWT6 349 aa12.84□□□□□ -0.35
ATG4B-209ENST00000425239 MRPL39Q9NYK5 338 aaKnown RBP12.84□□□□□ -0.35
ATG4B-209ENST00000425239 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.84□□□□□ -0.35
ATG4B-209ENST00000425239 V9GYY5 206 aaPredicted RBP12.84□□□□□ -0.35
ATG4B-209ENST00000425239 TRBV5-3A0A0A0MS03 114 aa12.83□□□□□ -0.36
ATG4B-209ENST00000425239 TMEM120BA0PK00 339 aa12.83□□□□□ -0.36
ATG4B-209ENST00000425239 UBDO15205 165 aa12.83□□□□□ -0.36
ATG4B-209ENST00000425239 PATE4P0C8F1 98 aa12.83□□□□□ -0.36
ATG4B-209ENST00000425239 GAAP10253 952 aa12.83□□□□□ -0.36
ATG4B-209ENST00000425239 B4GALT1P15291 398 aa12.83□□□□□ -0.36
ATG4B-209ENST00000425239 GTF2E2P29084 291 aaKnown RBP12.83□□□□□ -0.36
ATG4B-209ENST00000425239 CAPZA2P47755 286 aa12.83□□□□□ -0.36
ATG4B-209ENST00000425239 GIPRP48546 466 aa12.83□□□□□ -0.36
ATG4B-209ENST00000425239 SLC18A1P54219 525 aa12.83□□□□□ -0.36
ATG4B-209ENST00000425239 MRPS11P82912 194 aaKnown RBP12.83□□□□□ -0.36
ATG4B-209ENST00000425239 CAMK2DQ13557 499 aa12.83□□□□□ -0.36
ATG4B-209ENST00000425239 MAD2L1BPQ15013 274 aaPredicted RBP12.83□□□□□ -0.36
ATG4B-209ENST00000425239 OR1Q1Q15612 314 aa12.83□□□□□ -0.36
ATG4B-209ENST00000425239 C6orf10Q5SRN2 563 aa12.83□□□□□ -0.36
ATG4B-209ENST00000425239 HHATQ5VTY9 493 aa12.83□□□□□ -0.36
ATG4B-209ENST00000425239 PXKQ7Z7A4 578 aa12.83□□□□□ -0.36
ATG4B-209ENST00000425239 ANKRD42Q8N9B4 389 aa12.83□□□□□ -0.36
ATG4B-209ENST00000425239 TMEM54Q969K7 222 aa12.83□□□□□ -0.36
ATG4B-209ENST00000425239 SLC47A1Q96FL8 570 aa12.83□□□□□ -0.36
ATG4B-209ENST00000425239 METTL17Q9H7H0 456 aaPredicted RBP12.83□□□□□ -0.36
ATG4B-209ENST00000425239 ZNF275Q9NSD4 429 aaPredicted RBP12.83□□□□□ -0.36
ATG4B-209ENST00000425239 RPS6KB2Q9UBS0 482 aa12.83□□□□□ -0.36
ATG4B-209ENST00000425239 RAB21Q9UL25 225 aa12.83□□□□□ -0.36
ATG4B-209ENST00000425239 CORINQ9Y5Q5 1042 aa12.83□□□□□ -0.36
ATG4B-209ENST00000425239 TMEM247A6NEH6 219 aa12.82□□□□□ -0.36
ATG4B-209ENST00000425239 WIPF1O43516 503 aa12.82□□□□□ -0.36
ATG4B-209ENST00000425239 LYPD3O95274 346 aa12.82□□□□□ -0.36
ATG4B-209ENST00000425239 THY1P04216 161 aa12.82□□□□□ -0.36
ATG4B-209ENST00000425239 MSMBP08118 114 aa12.82□□□□□ -0.36
ATG4B-209ENST00000425239 NAT2P11245 290 aa12.82□□□□□ -0.36
ATG4B-209ENST00000425239 CD79AP11912 226 aa12.82□□□□□ -0.36
ATG4B-209ENST00000425239 GPR6P46095 362 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-209ENST00000425239 PTDSS1P48651 473 aaKnown RBP12.82□□□□□ -0.36
ATG4B-209ENST00000425239 CDH12P55289 794 aa12.82□□□□□ -0.36
ATG4B-209ENST00000425239 RAB39AQ14964 217 aa12.82□□□□□ -0.36
ATG4B-209ENST00000425239 PAGE3Q5JUK9 113 aa12.82□□□□□ -0.36
ATG4B-209ENST00000425239 LRFN4Q6PJG9 635 aa12.82□□□□□ -0.36
ATG4B-209ENST00000425239 EPGNQ6UW88 154 aa12.82□□□□□ -0.36
ATG4B-209ENST00000425239 GLCCI1Q86VQ1 547 aa12.82□□□□□ -0.36
ATG4B-209ENST00000425239 MIER2Q8N344 545 aa12.82□□□□□ -0.36
ATG4B-209ENST00000425239 PAQR4Q8N4S7 273 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-209ENST00000425239 NFKBIDQ8NI38 313 aa12.82□□□□□ -0.36
ATG4B-209ENST00000425239 FOXB1Q99853 325 aa12.82□□□□□ -0.36
ATG4B-209ENST00000425239 CENPHQ9H3R5 247 aa12.82□□□□□ -0.36
ATG4B-209ENST00000425239 G6PC2Q9NQR9 355 aa12.82□□□□□ -0.36
ATG4B-209ENST00000425239 TREM2Q9NZC2 230 aa12.82□□□□□ -0.36
ATG4B-209ENST00000425239 VAPAQ9P0L0 249 aa12.82□□□□□ -0.36
ATG4B-209ENST00000425239 FZR1Q9UM11 496 aa12.82□□□□□ -0.36
ATG4B-209ENST00000425239 NOX1Q9Y5S8 564 aa12.82□□□□□ -0.36
ATG4B-209ENST00000425239 IGLV3-9A0A075B6K5 115 aa12.81□□□□□ -0.36
ATG4B-209ENST00000425239 AKAP8O43823 692 aaKnown RBP12.81□□□□□ -0.36
ATG4B-209ENST00000425239 ZNF500O60304 480 aaPredicted RBP12.81□□□□□ -0.36
ATG4B-209ENST00000425239 SERPINA5P05154 406 aa12.81□□□□□ -0.36
ATG4B-209ENST00000425239 EGR1P18146 543 aa12.81□□□□□ -0.36
ATG4B-209ENST00000425239 GPX2P18283 190 aa12.81□□□□□ -0.36
ATG4B-209ENST00000425239 MAGEB1P43366 347 aa12.81□□□□□ -0.36
ATG4B-209ENST00000425239 ARFIP2P53365 341 aa12.81□□□□□ -0.36
ATG4B-209ENST00000425239 CDK6Q00534 326 aa12.81□□□□□ -0.36
ATG4B-209ENST00000425239 PUDPQ08623 228 aa12.81□□□□□ -0.36
ATG4B-209ENST00000425239 TRMT5Q32P41 509 aaKnown RBP12.81□□□□□ -0.36
ATG4B-209ENST00000425239 REEP3Q6NUK4 255 aa12.81□□□□□ -0.36
ATG4B-209ENST00000425239 BLOC1S3Q6QNY0 202 aa12.81□□□□□ -0.36
ATG4B-209ENST00000425239 PIWIL3Q7Z3Z3 882 aaKnown RBP12.81□□□□□ -0.36
ATG4B-209ENST00000425239 TMEM43Q9BTV4 400 aa12.81□□□□□ -0.36
ATG4B-209ENST00000425239 RAD21L1Q9H4I0 556 aa12.81□□□□□ -0.36
ATG4B-209ENST00000425239 OCEL1Q9H607 264 aa12.81□□□□□ -0.36
ATG4B-209ENST00000425239 ZNF385DQ9H6B1 395 aa12.81□□□□□ -0.36
ATG4B-209ENST00000425239 TMEM38AQ9H6F2 299 aa12.81□□□□□ -0.36
ATG4B-209ENST00000425239 TAS2R5Q9NYW4 299 aa12.81□□□□□ -0.36
ATG4B-209ENST00000425239 TESQ9UGI8 421 aaKnown RBP12.81□□□□□ -0.36
ATG4B-209ENST00000425239 POFUT2Q9Y2G5 429 aa12.81□□□□□ -0.36
ATG4B-209ENST00000425239 CMYA5Q8N3K9 4069 aa12.81□□□□□ -0.36
ATG4B-209ENST00000425239 MGAM2Q2M2H8 2515 aa12.8□□□□□ -0.36
ATG4B-209ENST00000425239 TMEM89A2RUT3 159 aa12.8□□□□□ -0.36
ATG4B-209ENST00000425239 DEAF1O75398 565 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms