RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 OR6X1Q8NH79 312 aa13.05□□□□□ -0.32
TMEM248-204ENST00000424964 GNPDA2Q8TDQ7 276 aa13.05□□□□□ -0.32
TMEM248-204ENST00000424964 ADAD1Q96M93 576 aaKnown RBP13.05□□□□□ -0.32
TMEM248-204ENST00000424964 USB1Q9BQ65 265 aaKnown RBP13.05□□□□□ -0.32
TMEM248-204ENST00000424964 NDEL1Q9GZM8 345 aa13.05□□□□□ -0.32
TMEM248-204ENST00000424964 B3GAT2Q9NPZ5 323 aa13.05□□□□□ -0.32
TMEM248-204ENST00000424964 CCM2LQ9NUG4 571 aaPredicted RBP13.05□□□□□ -0.32
TMEM248-204ENST00000424964 PRR14LQ5THK1 2151 aa13.05□□□□□ -0.32
TMEM248-204ENST00000424964 ANKHD1Q8IWZ3 2542 aaKnown RBP13.04□□□□□ -0.32
TMEM248-204ENST00000424964 UNC119BA6NIH7 251 aa13.04□□□□□ -0.32
TMEM248-204ENST00000424964 PDLIM1O00151 329 aa13.04□□□□□ -0.32
TMEM248-204ENST00000424964 CSNK1A1P48729 337 aa13.04□□□□□ -0.32
TMEM248-204ENST00000424964 PRPS1P60891 318 aa13.04□□□□□ -0.32
TMEM248-204ENST00000424964 TOP3AQ13472 1001 aaPredicted RBP13.04□□□□□ -0.32
TMEM248-204ENST00000424964 ACKR1Q16570 336 aa13.04□□□□□ -0.32
TMEM248-204ENST00000424964 OR7E24Q6IFN5 339 aa13.04□□□□□ -0.32
TMEM248-204ENST00000424964 C22orf34Q6ZV56 151 aa13.04□□□□□ -0.32
TMEM248-204ENST00000424964 LINGO2Q7L985 606 aa13.04□□□□□ -0.32
TMEM248-204ENST00000424964 WFDC8Q8IUA0 241 aa13.04□□□□□ -0.32
TMEM248-204ENST00000424964 WDFY1Q8IWB7 410 aa13.04□□□□□ -0.32
TMEM248-204ENST00000424964 C20orf196Q8IYI0 205 aa13.04□□□□□ -0.32
TMEM248-204ENST00000424964 LINC00471Q8N535 108 aa13.04□□□□□ -0.32
TMEM248-204ENST00000424964 PAPD5Q8NDF8 572 aaKnown RBP13.04□□□□□ -0.32
TMEM248-204ENST00000424964 OR4C15Q8NGM1 316 aa13.04□□□□□ -0.32
TMEM248-204ENST00000424964 HSD17B8Q92506 261 aa13.04□□□□□ -0.32
TMEM248-204ENST00000424964 ZNF566Q969W8 418 aa13.04□□□□□ -0.32
TMEM248-204ENST00000424964 UTP4Q969X6 686 aaKnown RBP13.04□□□□□ -0.32
TMEM248-204ENST00000424964 SLCO4A1Q96BD0 722 aa13.04□□□□□ -0.32
TMEM248-204ENST00000424964 MUCL1Q96DR8 90 aa13.04□□□□□ -0.32
TMEM248-204ENST00000424964 C14orf79Q96F83 325 aa13.04□□□□□ -0.32
TMEM248-204ENST00000424964 SLC25A44Q96H78 314 aaPredicted RBP13.04□□□□□ -0.32
TMEM248-204ENST00000424964 LRR1Q96L50 414 aa13.04□□□□□ -0.32
TMEM248-204ENST00000424964 GPA33Q99795 319 aa13.04□□□□□ -0.32
TMEM248-204ENST00000424964 TXNIPQ9H3M7 391 aa13.04□□□□□ -0.32
TMEM248-204ENST00000424964 GPR35Q9HC97 309 aa13.04□□□□□ -0.32
TMEM248-204ENST00000424964 VNN3Q9NY84 501 aa13.04□□□□□ -0.32
TMEM248-204ENST00000424964 ASH1LQ9NR48 2969 aaKnown RBP13.03□□□□□ -0.32
TMEM248-204ENST00000424964 OR5H1A6NKK0 313 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 A6NNC1 897 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 PTP4A3O75365 173 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 NDUFB2O95178 105 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 IGHG1P01857 330 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 THBDP07204 575 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 PRF1P14222 555 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 ACADSP16219 412 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 CLRN1P58418 232 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 FHL1Q13642 323 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 CCNIQ14094 377 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 DAZAP2Q15038 168 aaPredicted RBP13.03□□□□□ -0.32
TMEM248-204ENST00000424964 TAB1Q15750 504 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 GABRA6Q16445 453 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 MICAQ29983 383 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 CEACAM16Q2WEN9 425 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 TIMM23BQ5SRD1 257 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 PHYHD1Q5SRE7 291 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 C1orf94Q6P1W5 598 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 HDDC2Q7Z4H3 204 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 P2RY8Q86VZ1 359 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 LRRC75AQ8NAA5 344 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 OR9Q2Q8NGE9 314 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 ASB10Q8WXI3 467 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 MUS81Q96NY9 551 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 POLDIP3Q9BY77 421 aaKnown RBP13.03□□□□□ -0.32
TMEM248-204ENST00000424964 ULBP2Q9BZM5 246 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 CRLF2Q9HC73 371 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 STX18Q9P2W9 335 aaKnown RBP13.03□□□□□ -0.32
TMEM248-204ENST00000424964 ZNF346Q9UL40 294 aaKnown RBP13.03□□□□□ -0.32
TMEM248-204ENST00000424964 SIGLEC7Q9Y286 467 aa13.03□□□□□ -0.32
TMEM248-204ENST00000424964 RPL36A-HNRNPH2H7BZ11 118 aa13.02□□□□□ -0.33
TMEM248-204ENST00000424964 KLF4O43474 513 aa13.02□□□□□ -0.33
TMEM248-204ENST00000424964 E2F6O75461 281 aa13.02□□□□□ -0.33
TMEM248-204ENST00000424964 TRMUO75648 421 aaKnown RBP13.02□□□□□ -0.33
TMEM248-204ENST00000424964 TIPRLO75663 272 aa13.02□□□□□ -0.33
TMEM248-204ENST00000424964 ZNF26P17031 533 aaPredicted RBP13.02□□□□□ -0.33
TMEM248-204ENST00000424964 CRYGSP22914 178 aa13.02□□□□□ -0.33
TMEM248-204ENST00000424964 FPR3P25089 353 aa13.02□□□□□ -0.33
TMEM248-204ENST00000424964 HOXC12P31275 282 aa13.02□□□□□ -0.33
TMEM248-204ENST00000424964 ACVR1BP36896 505 aa13.02□□□□□ -0.33
TMEM248-204ENST00000424964 IST1P53990 364 aa13.02□□□□□ -0.33
TMEM248-204ENST00000424964 RPL27P61353 136 aaKnown RBP13.02□□□□□ -0.33
TMEM248-204ENST00000424964 ERVK-25P63136 954 aa13.02□□□□□ -0.33
TMEM248-204ENST00000424964 TSPAN31Q12999 210 aa13.02□□□□□ -0.33
TMEM248-204ENST00000424964 PPA1Q15181 289 aa13.02□□□□□ -0.33
TMEM248-204ENST00000424964 ARMC4Q5T2S8 1044 aa13.02□□□□□ -0.33
TMEM248-204ENST00000424964 PGBD2Q6P3X8 592 aa13.02□□□□□ -0.33
TMEM248-204ENST00000424964 TMEM200AQ86VY9 491 aa13.02□□□□□ -0.33
TMEM248-204ENST00000424964 SYT14Q8NB59 555 aa13.02□□□□□ -0.33
TMEM248-204ENST00000424964 AQP11Q8NBQ7 271 aa13.02□□□□□ -0.33
TMEM248-204ENST00000424964 C1orf162Q8NEQ5 155 aaPredicted RBP13.02□□□□□ -0.33
TMEM248-204ENST00000424964 OR52N5Q8NH56 324 aa13.02□□□□□ -0.33
TMEM248-204ENST00000424964 TMEM54Q969K7 222 aa13.02□□□□□ -0.33
TMEM248-204ENST00000424964 ZNF837Q96EG3 531 aaPredicted RBP13.02□□□□□ -0.33
TMEM248-204ENST00000424964 RAB3IPQ96QF0 476 aaPredicted RBP13.02□□□□□ -0.33
TMEM248-204ENST00000424964 KATNB1Q9BVA0 655 aa13.02□□□□□ -0.33
TMEM248-204ENST00000424964 GLTPQ9NZD2 209 aa13.02□□□□□ -0.33
TMEM248-204ENST00000424964 DNAJB9Q9UBS3 223 aa13.02□□□□□ -0.33
TMEM248-204ENST00000424964 IL20RAQ9UHF4 553 aa13.02□□□□□ -0.33
TMEM248-204ENST00000424964 POFUT2Q9Y2G5 429 aa13.02□□□□□ -0.33
TMEM248-204ENST00000424964 A0A1W2PR80 420 aa13.01□□□□□ -0.33
TMEM248-204ENST00000424964 NPIPB13A6NJU9 1138 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms