RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 JAZF1Q86VZ6 243 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 TMEM229BQ8NBD8 167 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 ZBTB44Q8NCP5 570 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 OR51L1Q8NGJ5 315 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 OR6K6Q8NGW6 343 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 OR2G2Q8NGZ5 317 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 ADAMTS18Q8TE60 1221 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 GPX8Q8TED1 209 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 PCNPQ8WW12 178 aaKnown RBP13.86□□□□□ -0.19
C9orf3-204ENST00000424143 OR1E3Q8WZA6 343 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 PHYHIPLQ96FC7 376 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 CXorf58Q96LI9 332 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 WDR92Q96MX6 357 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 SEMA4CQ9C0C4 833 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 ARL6Q9H0F7 186 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 SLC6A15Q9H2J7 730 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 WDR76Q9H967 626 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 EXOSC3Q9NQT5 275 aaKnown RBP13.86□□□□□ -0.19
C9orf3-204ENST00000424143 ZC4H2Q9NQZ6 224 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 C2orf74A8MZ97 194 aa13.85□□□□□ -0.19
C9orf3-204ENST00000424143 ABCD4O14678 606 aa13.85□□□□□ -0.19
C9orf3-204ENST00000424143 CDC40O60508 579 aaKnown RBP eCLIP13.85□□□□□ -0.19
C9orf3-204ENST00000424143 SDC3O75056 442 aa13.85□□□□□ -0.19
C9orf3-204ENST00000424143 CTAG2O75638 210 aa13.85□□□□□ -0.19
C9orf3-204ENST00000424143 EML2O95834 649 aa13.85□□□□□ -0.19
C9orf3-204ENST00000424143 SLC25A4P12235 298 aa13.85□□□□□ -0.19
C9orf3-204ENST00000424143 HLA-GP17693 338 aa13.85□□□□□ -0.19
C9orf3-204ENST00000424143 ALOX5APP20292 161 aa13.85□□□□□ -0.19
C9orf3-204ENST00000424143 RPS15P62841 145 aaKnown RBP13.85□□□□□ -0.19
C9orf3-204ENST00000424143 ERVK-25P63136 954 aa13.85□□□□□ -0.19
C9orf3-204ENST00000424143 BTN1A1Q13410 526 aa13.85□□□□□ -0.19
C9orf3-204ENST00000424143 ZNF74Q16587 644 aa13.85□□□□□ -0.19
C9orf3-204ENST00000424143 PCGF3Q3KNV8 242 aa13.85□□□□□ -0.19
C9orf3-204ENST00000424143 STPG1Q5TH74 334 aa13.85□□□□□ -0.19
C9orf3-204ENST00000424143 WBP2NLQ6ICG8 309 aa13.85□□□□□ -0.19
C9orf3-204ENST00000424143 LEG1Q6P5S2 330 aa13.85□□□□□ -0.19
C9orf3-204ENST00000424143 PSRC1Q6PGN9 363 aaPredicted RBP13.85□□□□□ -0.19
C9orf3-204ENST00000424143 CLEC1AQ8NC01 280 aa13.85□□□□□ -0.19
C9orf3-204ENST00000424143 OR52H1Q8NGJ2 320 aa13.85□□□□□ -0.19
C9orf3-204ENST00000424143 PIGKQ92643 395 aa13.85□□□□□ -0.19
C9orf3-204ENST00000424143 DCBLD2Q96PD2 775 aa13.85□□□□□ -0.19
C9orf3-204ENST00000424143 OR1F2PQ96R84 312 aa13.85□□□□□ -0.19
C9orf3-204ENST00000424143 TTTY10Q9BZA0 68 aa13.85□□□□□ -0.19
C9orf3-204ENST00000424143 CCDC86Q9H6F5 360 aaKnown RBP13.85□□□□□ -0.19
C9orf3-204ENST00000424143 Q9N2J8 555 aa13.85□□□□□ -0.19
C9orf3-204ENST00000424143 MRPS2Q9Y399 296 aaKnown RBP13.85□□□□□ -0.19
C9orf3-204ENST00000424143 PDE4DIPQ5VU43 2346 aa13.84□□□□□ -0.19
C9orf3-204ENST00000424143 CENPFP49454 3210 aa13.84□□□□□ -0.19
C9orf3-204ENST00000424143 IGKV1D-42A0A075B6H8 117 aa13.84□□□□□ -0.19
C9orf3-204ENST00000424143 A0A0J9YY10 115 aa13.84□□□□□ -0.19
C9orf3-204ENST00000424143 SLC17A2O00624 439 aa13.84□□□□□ -0.19
C9orf3-204ENST00000424143 TSPAN4O14817 238 aa13.84□□□□□ -0.19
C9orf3-204ENST00000424143 ARPC5O15511 151 aa13.84□□□□□ -0.19
C9orf3-204ENST00000424143 NARSO43776 548 aaKnown RBP13.84□□□□□ -0.19
C9orf3-204ENST00000424143 OR10H2O60403 315 aa13.84□□□□□ -0.19
C9orf3-204ENST00000424143 CDC123O75794 336 aaPredicted RBP13.84□□□□□ -0.19
C9orf3-204ENST00000424143 POU3F2P20265 443 aaPredicted RBP13.84□□□□□ -0.19
C9orf3-204ENST00000424143 PRSS3P35030 304 aa13.84□□□□□ -0.19
C9orf3-204ENST00000424143 CLDN12P56749 244 aa13.84□□□□□ -0.19
C9orf3-204ENST00000424143 DBPQ10586 325 aaPredicted RBP13.84□□□□□ -0.19
C9orf3-204ENST00000424143 BIKQ13323 160 aa13.84□□□□□ -0.19
C9orf3-204ENST00000424143 COL9A2Q14055 689 aaPredicted RBP13.84□□□□□ -0.19
C9orf3-204ENST00000424143 SFRP5Q5T4F7 317 aa13.84□□□□□ -0.19
C9orf3-204ENST00000424143 NHLRC1Q6VVB1 395 aa13.84□□□□□ -0.19
C9orf3-204ENST00000424143 TMPRSS12Q86WS5 348 aa13.84□□□□□ -0.19
C9orf3-204ENST00000424143 MUC20Q8N307 709 aaPredicted RBP13.84□□□□□ -0.19
C9orf3-204ENST00000424143 OR10Z1Q8NGY1 313 aa13.84□□□□□ -0.19
C9orf3-204ENST00000424143 COQ8AQ8NI60 647 aa13.84□□□□□ -0.19
C9orf3-204ENST00000424143 FGF13Q92913 245 aa13.84□□□□□ -0.19
C9orf3-204ENST00000424143 GCDHQ92947 438 aaPredicted RBP13.84□□□□□ -0.19
C9orf3-204ENST00000424143 RASD2Q96D21 266 aa13.84□□□□□ -0.19
C9orf3-204ENST00000424143 TSPAN10Q9H1Z9 355 aaPredicted RBP13.84□□□□□ -0.19
C9orf3-204ENST00000424143 RASL12Q9NYN1 266 aa13.84□□□□□ -0.19
C9orf3-204ENST00000424143 GOLGA4Q13439 2230 aaKnown RBP13.84□□□□□ -0.19
C9orf3-204ENST00000424143 HTTP42858 3142 aa13.84□□□□□ -0.19
C9orf3-204ENST00000424143 LOC100289279A0A1B0GTE1 492 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 IDSB3KWA1 339 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 EIF4E2O60573 245 aaKnown RBP13.83□□□□□ -0.2
C9orf3-204ENST00000424143 PRAMEF2O60811 474 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 OR2F2O95006 317 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 CSTAP01040 98 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 ASAH2BP0C7U1 165 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 OR8G3PP0DMU2 310 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 ZNF35P13682 527 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 NAT1P18440 290 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 MPZP25189 248 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 CAPZA1P52907 286 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 ADPRHP54922 357 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 TAS2R19P59542 299 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 DMWDQ09019 674 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 OR2F1Q13607 317 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 KLHL26Q53HC5 615 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 EEF1A1P5Q5VTE0 462 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 NKAIN2Q5VXU1 208 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 OR7E24Q6IFN5 339 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 MOB3CQ70IA8 216 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 ATG4DQ86TL0 474 aaPredicted RBP13.83□□□□□ -0.2
C9orf3-204ENST00000424143 ARHGEF39Q8N4T4 335 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 CSNK1A1LQ8N752 337 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 ZNF454Q8N9F8 522 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms