RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 IL1RL1Q01638 556 aa16.22■□□□□ 0.19
HDAC6-205ENST00000423941 TAB1Q15750 504 aa16.22■□□□□ 0.19
HDAC6-205ENST00000423941 STK11Q15831 433 aa16.22■□□□□ 0.19
HDAC6-205ENST00000423941 HIST3H3Q16695 136 aa16.22■□□□□ 0.19
HDAC6-205ENST00000423941 ZBED5Q49AG3 693 aa16.22■□□□□ 0.19
HDAC6-205ENST00000423941 PHYHD1Q5SRE7 291 aa16.22■□□□□ 0.19
HDAC6-205ENST00000423941 ARMC4Q5T2S8 1044 aa16.22■□□□□ 0.19
HDAC6-205ENST00000423941 OR2T5Q6IEZ7 315 aa16.22■□□□□ 0.19
HDAC6-205ENST00000423941 ZNF770Q6IQ21 691 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-205ENST00000423941 C1orf94Q6P1W5 598 aa16.22■□□□□ 0.19
HDAC6-205ENST00000423941 CCDC121Q6ZUS5 278 aa16.22■□□□□ 0.19
HDAC6-205ENST00000423941 ZNF627Q7L945 461 aa16.22■□□□□ 0.19
HDAC6-205ENST00000423941 SSX8Q7RTT4 187 aa16.22■□□□□ 0.19
HDAC6-205ENST00000423941 OR2T29Q8NH02 315 aa16.22■□□□□ 0.19
HDAC6-205ENST00000423941 TMEM54Q969K7 222 aa16.22■□□□□ 0.19
HDAC6-205ENST00000423941 SLCO4A1Q96BD0 722 aa16.22■□□□□ 0.19
HDAC6-205ENST00000423941 SLC25A44Q96H78 314 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-205ENST00000423941 CCM2LQ9NUG4 571 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-205ENST00000423941 ZNF226Q9NYT6 803 aa16.22■□□□□ 0.19
HDAC6-205ENST00000423941 CENPBD1B2RD01 187 aa16.21■□□□□ 0.19
HDAC6-205ENST00000423941 CASKO14936 926 aa16.21■□□□□ 0.19
HDAC6-205ENST00000423941 CLOCKO15516 846 aa16.21■□□□□ 0.19
HDAC6-205ENST00000423941 BCL10O95999 233 aa16.21■□□□□ 0.19
HDAC6-205ENST00000423941 HRGP04196 525 aa16.21■□□□□ 0.19
HDAC6-205ENST00000423941 PGA4P0DJD7 388 aa16.21■□□□□ 0.19
HDAC6-205ENST00000423941 PGA3P0DJD8 388 aa16.21■□□□□ 0.19
HDAC6-205ENST00000423941 GSSP48637 474 aa16.21■□□□□ 0.19
HDAC6-205ENST00000423941 FXYD6P3P58550 94 aa16.21■□□□□ 0.19
HDAC6-205ENST00000423941 PRPS1P60891 318 aa16.21■□□□□ 0.19
HDAC6-205ENST00000423941 TGFBR3Q03167 851 aa16.21■□□□□ 0.19
HDAC6-205ENST00000423941 GK3PQ14409 553 aa16.21■□□□□ 0.19
HDAC6-205ENST00000423941 TAF11Q15544 211 aa16.21■□□□□ 0.19
HDAC6-205ENST00000423941 ALG10Q5BKT4 473 aa16.21■□□□□ 0.19
HDAC6-205ENST00000423941 C17orf78Q8N4C9 275 aa16.21■□□□□ 0.19
HDAC6-205ENST00000423941 WDR31Q8NA23 367 aa16.21■□□□□ 0.19
HDAC6-205ENST00000423941 OR13C2Q8NGS9 318 aa16.21■□□□□ 0.19
HDAC6-205ENST00000423941 OR51A7Q8NH64 312 aa16.21■□□□□ 0.19
HDAC6-205ENST00000423941 MAGEE2Q8TD90 523 aaPredicted RBP16.21■□□□□ 0.19
HDAC6-205ENST00000423941 ASB10Q8WXI3 467 aa16.21■□□□□ 0.19
HDAC6-205ENST00000423941 ZNF837Q96EG3 531 aaPredicted RBP16.21■□□□□ 0.19
HDAC6-205ENST00000423941 DUS3LQ96G46 650 aaKnown RBP16.21■□□□□ 0.19
HDAC6-205ENST00000423941 FAM46AQ96IP4 442 aaKnown RBP16.21■□□□□ 0.19
HDAC6-205ENST00000423941 TXNIPQ9H3M7 391 aa16.21■□□□□ 0.19
HDAC6-205ENST00000423941 GPR35Q9HC97 309 aa16.21■□□□□ 0.19
HDAC6-205ENST00000423941 VNN3Q9NY84 501 aa16.21■□□□□ 0.19
HDAC6-205ENST00000423941 TRAV27A0A087WT01 109 aa16.2■□□□□ 0.18
HDAC6-205ENST00000423941 A0A1W2PRG6 482 aa16.2■□□□□ 0.18
HDAC6-205ENST00000423941 ZNF726A6NNF4 738 aa16.2■□□□□ 0.18
HDAC6-205ENST00000423941 ZNF587BE7ETH6 402 aa16.2■□□□□ 0.18
HDAC6-205ENST00000423941 TNFRSF11BO00300 401 aa16.2■□□□□ 0.18
HDAC6-205ENST00000423941 ZNF133P52736 654 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-205ENST00000423941 SH3BGRP55822 239 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-205ENST00000423941 ROR2Q01974 943 aaKnown RBP16.2■□□□□ 0.18
HDAC6-205ENST00000423941 CAMK2DQ13557 499 aa16.2■□□□□ 0.18
HDAC6-205ENST00000423941 ACKR1Q16570 336 aa16.2■□□□□ 0.18
HDAC6-205ENST00000423941 LRFN4Q6PJG9 635 aa16.2■□□□□ 0.18
HDAC6-205ENST00000423941 GPR137CQ8N3F9 429 aa16.2■□□□□ 0.18
HDAC6-205ENST00000423941 LINC00471Q8N535 108 aa16.2■□□□□ 0.18
HDAC6-205ENST00000423941 BCL2L2Q92843 193 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-205ENST00000423941 NMD3Q96D46 503 aaKnown RBP16.2■□□□□ 0.18
HDAC6-205ENST00000423941 ALKBH3Q96Q83 286 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-205ENST00000423941 GPX7Q96SL4 187 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-205ENST00000423941 NELFAQ9H3P2 528 aa16.2■□□□□ 0.18
HDAC6-205ENST00000423941 TMCC3Q9ULS5 477 aa16.2■□□□□ 0.18
HDAC6-205ENST00000423941 SLC25A15Q9Y619 301 aa16.2■□□□□ 0.18
HDAC6-205ENST00000423941 PDZD2O15018 2839 aa16.2■□□□□ 0.18
HDAC6-205ENST00000423941 ABCA4P78363 2273 aa16.19■□□□□ 0.18
HDAC6-205ENST00000423941 CIB4A0PJX0 185 aa16.19■□□□□ 0.18
HDAC6-205ENST00000423941 RAD51DO75771 328 aa16.19■□□□□ 0.18
HDAC6-205ENST00000423941 HOXB1P14653 301 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-205ENST00000423941 FPR3P25089 353 aa16.19■□□□□ 0.18
HDAC6-205ENST00000423941 DAP3P51398 398 aaKnown RBP16.19■□□□□ 0.18
HDAC6-205ENST00000423941 KRTAP10-9P60411 292 aa16.19■□□□□ 0.18
HDAC6-205ENST00000423941 RUNX1T1Q06455 604 aa16.19■□□□□ 0.18
HDAC6-205ENST00000423941 MELKQ14680 651 aa16.19■□□□□ 0.18
HDAC6-205ENST00000423941 PGBD2Q6P3X8 592 aa16.19■□□□□ 0.18
HDAC6-205ENST00000423941 FAM122BQ7Z309 247 aa16.19■□□□□ 0.18
HDAC6-205ENST00000423941 SPATA24Q86W54 205 aa16.19■□□□□ 0.18
HDAC6-205ENST00000423941 OR1K1Q8NGR3 316 aa16.19■□□□□ 0.18
HDAC6-205ENST00000423941 CRLF2Q9HC73 371 aa16.19■□□□□ 0.18
HDAC6-205ENST00000423941 KRCC1Q9NPI7 259 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-205ENST00000423941 SLC17A5Q9NRA2 495 aa16.19■□□□□ 0.18
HDAC6-205ENST00000423941 GLTPQ9NZD2 209 aa16.19■□□□□ 0.18
HDAC6-205ENST00000423941 ZNF346Q9UL40 294 aaKnown RBP16.19■□□□□ 0.18
HDAC6-205ENST00000423941 AURKCQ9UQB9 309 aa16.19■□□□□ 0.18
HDAC6-205ENST00000423941 LRBAP50851 2863 aa16.19■□□□□ 0.18
HDAC6-205ENST00000423941 A0A1W2PPR1 153 aa16.18■□□□□ 0.18
HDAC6-205ENST00000423941 MCIDASD6RGH6 385 aa16.18■□□□□ 0.18
HDAC6-205ENST00000423941 TRMUO75648 421 aaKnown RBP16.18■□□□□ 0.18
HDAC6-205ENST00000423941 SERPINI2O75830 405 aa16.18■□□□□ 0.18
HDAC6-205ENST00000423941 KRT33AO76009 404 aa16.18■□□□□ 0.18
HDAC6-205ENST00000423941 CST1P01037 141 aa16.18■□□□□ 0.18
HDAC6-205ENST00000423941 CD14P08571 375 aa16.18■□□□□ 0.18
HDAC6-205ENST00000423941 ACADSP16219 412 aa16.18■□□□□ 0.18
HDAC6-205ENST00000423941 IFNGR2P38484 337 aa16.18■□□□□ 0.18
HDAC6-205ENST00000423941 CTXN1P60606 82 aa16.18■□□□□ 0.18
HDAC6-205ENST00000423941 RPL27P61353 136 aaKnown RBP16.18■□□□□ 0.18
HDAC6-205ENST00000423941 TSPAN31Q12999 210 aa16.18■□□□□ 0.18
HDAC6-205ENST00000423941 CEACAM16Q2WEN9 425 aa16.18■□□□□ 0.18
HDAC6-205ENST00000423941 C9orf135Q5VTT2 229 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms