RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 PQLC1Q8N2U9 271 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 MZB1Q8WU39 189 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 TRUB1Q8WWH5 349 aaKnown RBP3.21□□□□□ -1.9
TOP2A-201ENST00000423485 MRGPRX2Q96LB1 330 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 CPNE1Q99829 537 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 HINT2Q9BX68 163 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 MARCH7Q9H992 704 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 SMPD3Q9NY59 655 aaPredicted RBP3.21□□□□□ -1.9
TOP2A-201ENST00000423485 ACTR3BQ9P1U1 418 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 AP4S1Q9Y587 144 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 GPC6Q9Y625 555 aaPredicted RBP3.21□□□□□ -1.9
TOP2A-201ENST00000423485 THSD7BQ9C0I4 1608 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 KIAA2026Q5HYC2 2103 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 LOC105371242A0A075B767 164 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 TRBC2A0A5B9 178 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 H0Y980 276 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 CXCL13O43927 109 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 KLHL2O95198 593 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 H6PDO95479 791 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 TEAD1P28347 426 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 GLP1RP43220 463 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 MAGEA4P43358 317 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 MAGEA5P43359 124 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 STC1P52823 247 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 MPP1Q00013 466 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 SELENBP1Q13228 472 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 HSD17B12Q53GQ0 312 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 GCNT7Q6ZNI0 430 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 C1orf229Q6ZS94 237 aaPredicted RBP3.21□□□□□ -1.9
TOP2A-201ENST00000423485 MKXQ8IYA7 352 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 SLC25A40Q8TBP6 338 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 HOXB13Q92826 284 aaPredicted RBP3.21□□□□□ -1.9
TOP2A-201ENST00000423485 MSI2Q96DH6 328 aaKnown RBP3.21□□□□□ -1.9
TOP2A-201ENST00000423485 ZNF347Q96SE7 839 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 BHLHE41Q9C0J9 482 aaPredicted RBP3.21□□□□□ -1.9
TOP2A-201ENST00000423485 APOBEC3GQ9HC16 384 aaKnown RBP3.21□□□□□ -1.9
TOP2A-201ENST00000423485 MID1IP1Q9NPA3 183 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 TMEM100Q9NV29 134 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 CGGBP1Q9UFW8 167 aaPredicted RBP3.21□□□□□ -1.9
TOP2A-201ENST00000423485 NUP50Q9UKX7 468 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 TENM3Q9P273 2699 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 PCNX1Q96RV3 2341 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 DIDO1Q9BTC0 2240 aaKnown RBP3.21□□□□□ -1.9
TOP2A-201ENST00000423485 RNF103-CHMP3A0A140T963 221 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 A0A1W2PPM1 405 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 ODAMA1E959 279 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 INAFM1C9JVW0 142 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 CTNSO60931 367 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 CNOT3O75175 753 aaKnown RBP3.21□□□□□ -1.9
TOP2A-201ENST00000423485 H2BFMP0C1H6 154 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 FOLR1P15328 257 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 UCHL3P15374 230 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 TCF4P15884 667 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 COX7A1P24310 79 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 SEC24CP53992 1094 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 ZP1P60852 638 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 GNB1P62873 340 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 ARF5P84085 180 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 DEFA6Q01524 100 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 SF3A3Q12874 501 aaKnown RBP eCLIP3.21□□□□□ -1.9
TOP2A-201ENST00000423485 ALG10BQ5I7T1 473 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 PIP5KL1Q5T9C9 394 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 CXXC5Q7LFL8 322 aaKnown RBP3.21□□□□□ -1.9
TOP2A-201ENST00000423485 ADGRG3Q86Y34 549 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 ANKRD53Q8N9V6 530 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 NAT14Q8WUY8 206 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 TMIGD2Q96BF3 282 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 ZNF184Q99676 751 aaPredicted RBP3.21□□□□□ -1.9
TOP2A-201ENST00000423485 GINS4Q9BRT9 223 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 PPA2Q9H2U2 334 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 PLEKHA2Q9HB19 425 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 ABHD10Q9NUJ1 306 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 CYB5R1Q9UHQ9 305 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 HAO1Q9UJM8 370 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 FRAS1Q86XX4 4008 aa3.21□□□□□ -1.9
TOP2A-201ENST00000423485 IGLV3-22A0A075B6J6 115 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 MEIS3P2A8K0S8 358 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 FAM25AB3EWG3 89 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 FAM25CB3EWG5 89 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 FAM25GB3EWG6 89 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 C11orf98E9PRG8 122 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 TRAPPC2LH3BP13 241 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 K7ERQ8 282 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 SPINT2O43291 252 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 ATP6V1G1O75348 118 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 TGFB1P01137 390 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 ALDOCP09972 364 aaKnown RBP3.2□□□□□ -1.9
TOP2A-201ENST00000423485 C1GALT1C1LP0DN25 315 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 NFYBP25208 207 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 RBM34P42696 430 aaKnown RBP3.2□□□□□ -1.9
TOP2A-201ENST00000423485 DGCR2P98153 550 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 PPP3CAQ08209 521 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 GK3PQ14409 553 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 CNN3Q15417 329 aaKnown RBP3.2□□□□□ -1.9
TOP2A-201ENST00000423485 CDONQ4KMG0 1287 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 RUNDC3AQ59EK9 446 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 RAB12Q6IQ22 244 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 ADNP2Q6IQ32 1131 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 FAHD1Q6P587 224 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 BNIPLQ7Z465 357 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms