RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 TEX19Q8NA77 164 aa12.51□□□□□ -0.41
CTCFL-203ENST00000422109 HAVCR2Q8TDQ0 301 aa12.51□□□□□ -0.41
CTCFL-203ENST00000422109 AIPO00170 330 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 ZNF264O43296 627 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 SIX6O95475 246 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 ENPP1P22413 925 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 DPP4P27487 766 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 P2RX3P56373 397 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 PER3P56645 1201 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 ALKBH1Q13686 389 aaKnown RBP12.5□□□□□ -0.41
CTCFL-203ENST00000422109 LINC00303Q3SY05 128 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 MAMSTRQ6ZN01 415 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 MDGA2Q7Z553 956 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 ARHGEF39Q8N4T4 335 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 ZNF680Q8NEM1 530 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 UBQLN4Q9NRR5 601 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 KLHL9Q9P2J3 617 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 MGAT4CQ9UBM8 478 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 SLC22A13Q9Y226 551 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 C2CD4DB7Z1M9 353 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 TEX46H3BTG2 121 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 TNFRSF10AO00220 468 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 RLN1P04808 185 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 BLVRAP53004 296 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 TSPAN5P62079 268 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 GGTLC2Q14390 218 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 CLPPQ16740 277 aaPredicted RBP12.5□□□□□ -0.41
CTCFL-203ENST00000422109 CD276Q5ZPR3 534 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 ZNF767PQ75MW2 155 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 ATG4DQ86TL0 474 aaPredicted RBP12.5□□□□□ -0.41
CTCFL-203ENST00000422109 OR51D1Q8NGF3 324 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 OR56B4Q8NH76 319 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 PTPMT1Q8WUK0 201 aaPredicted RBP12.5□□□□□ -0.41
CTCFL-203ENST00000422109 NMNAT2Q9BZQ4 307 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 SLITRK2Q9H156 845 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 RANBP3Q9H6Z4 567 aaPredicted RBP12.5□□□□□ -0.41
CTCFL-203ENST00000422109 NOX3Q9HBY0 568 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 PRDM9Q9NQV7 894 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 DLL4Q9NR61 685 aa12.5□□□□□ -0.41
CTCFL-203ENST00000422109 FAM221BA6H8Z2 402 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 PDCD5O14737 125 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 PEX14O75381 377 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 NSA2O95478 260 aaKnown RBP12.49□□□□□ -0.41
CTCFL-203ENST00000422109 ALDOBP05062 364 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 CCKBRP32239 447 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 EFNB2P52799 333 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 PSMD4P55036 377 aaKnown RBP12.49□□□□□ -0.41
CTCFL-203ENST00000422109 FUT7Q11130 342 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 BIKQ13323 160 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 MELKQ14680 651 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 ZBTB37Q5TC79 503 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 SLC22A10Q63ZE4 541 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 PWWP2BQ6NUJ5 590 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 TEX261Q6UWH6 196 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 NLRC3Q7RTR2 1065 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 DVL3Q92997 716 aaPredicted RBP12.49□□□□□ -0.41
CTCFL-203ENST00000422109 MESP1Q9BRJ9 268 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 EMC7Q9NPA0 242 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 CA10Q9NS85 328 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 U3KQ87 197 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 FREM3P0C091 2139 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 IGHV3-20A0A0C4DH32 117 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 ARPC3O15145 178 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 UPK3AO75631 287 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 CFDP00746 253 aaPredicted RBP12.49□□□□□ -0.41
CTCFL-203ENST00000422109 SPARCP09486 303 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 PSMB1P20618 241 aaKnown RBP12.49□□□□□ -0.41
CTCFL-203ENST00000422109 CXCR1P25024 350 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 SDHAP31040 664 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 P2RX1P51575 399 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 ART1P52961 327 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 SKP2Q13309 424 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 CAMK2DQ13557 499 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 RFPL4BQ6ZWI9 263 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 CHMP1BQ7LBR1 199 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 FAM109AQ8N4B1 249 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 MEIOBQ8N635 442 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 RNF166Q96A37 237 aaPredicted RBP12.49□□□□□ -0.41
CTCFL-203ENST00000422109 MRPL48Q96GC5 212 aaKnown RBP12.49□□□□□ -0.41
CTCFL-203ENST00000422109 MAP6Q96JE9 813 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 OR11A1Q9GZK7 315 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 FOXJ3Q9UPW0 622 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 VPS13AQ96RL7 3174 aa12.49□□□□□ -0.41
CTCFL-203ENST00000422109 TMEM150CB9EJG8 249 aa12.48□□□□□ -0.41
CTCFL-203ENST00000422109 SRPX2O60687 465 aaPredicted RBP12.48□□□□□ -0.41
CTCFL-203ENST00000422109 KDM4BO94953 1096 aa12.48□□□□□ -0.41
CTCFL-203ENST00000422109 CLPSP04118 112 aa12.48□□□□□ -0.41
CTCFL-203ENST00000422109 TACSTD2P09758 323 aa12.48□□□□□ -0.41
CTCFL-203ENST00000422109 LTBRP36941 435 aa12.48□□□□□ -0.41
CTCFL-203ENST00000422109 PTH2RP49190 550 aa12.48□□□□□ -0.41
CTCFL-203ENST00000422109 ARL4DP49703 201 aa12.48□□□□□ -0.41
CTCFL-203ENST00000422109 ZNF117Q03924 483 aa12.48□□□□□ -0.41
CTCFL-203ENST00000422109 SMAD2Q15796 467 aaKnown RBP12.48□□□□□ -0.41
CTCFL-203ENST00000422109 Q499Y3 187 aa12.48□□□□□ -0.41
CTCFL-203ENST00000422109 NHLRC1Q6VVB1 395 aa12.48□□□□□ -0.41
CTCFL-203ENST00000422109 SLC16A9Q7RTY1 509 aa12.48□□□□□ -0.41
CTCFL-203ENST00000422109 FAM122BQ7Z309 247 aa12.48□□□□□ -0.41
CTCFL-203ENST00000422109 PMM1Q92871 262 aa12.48□□□□□ -0.41
CTCFL-203ENST00000422109 TCTN2Q96GX1 697 aa12.48□□□□□ -0.41
CTCFL-203ENST00000422109 ZMAT3Q9HA38 289 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms