RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 LRRN1Q6UXK5 716 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 LRRC28Q86X40 367 aaPredicted RBP9.92□□□□□ -0.82
DDX56-203ENST00000421223 OR5M1Q8NGP8 315 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 ACOT12Q8WYK0 555 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 RFT1Q96AA3 541 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 ST6GAL2Q96JF0 529 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 EVA1AQ9H8M9 152 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 FKRPQ9H9S5 495 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 TAS2R10Q9NYW0 307 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 SUSD2Q9UGT4 822 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 NPFFR2Q9Y5X5 522 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 TRBV11-1A0A0K0K1C0 115 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 CENPXA8MT69 81 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 PATE3B3GLJ2 98 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 ASAH2BP0C7U1 165 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 SRMP19623 302 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 RPS4XP62701 263 aaKnown RBP9.92□□□□□ -0.82
DDX56-203ENST00000421223 SHBQ15464 509 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 ACKR1Q16570 336 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 CDONQ4KMG0 1287 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 PAPD4Q6PIY7 484 aaKnown RBP9.92□□□□□ -0.82
DDX56-203ENST00000421223 OR2T4Q8NH00 348 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 MAFAQ8NHW3 353 aaPredicted RBP9.92□□□□□ -0.82
DDX56-203ENST00000421223 LGALS14Q8TCE9 139 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 PPP1R14AQ96A00 147 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 SLC19A3Q9BZV2 496 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 RAB33BQ9H082 229 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 RBFOX1Q9NWB1 397 aaKnown RBP9.92□□□□□ -0.82
DDX56-203ENST00000421223 KLRF1Q9NZS2 232 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 KCNG2Q9UJ96 466 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 FER1L5A0AVI2 2057 aa9.92□□□□□ -0.82
DDX56-203ENST00000421223 A0A0B4J293 547 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 A0A1W2PQM1 296 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 EPXP11678 715 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 THBS2P35442 1172 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 DDOSTP39656 456 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 EMP2P54851 167 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 CBFBQ13951 182 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 TRAM1Q15629 374 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 FAM122BQ7Z309 247 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 FAM71CQ8NEG0 241 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 OR10AC1Q8NH08 325 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 ZNF417Q8TAU3 575 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 MRPL48Q96GC5 212 aaKnown RBP9.91□□□□□ -0.82
DDX56-203ENST00000421223 ZNF587Q96SQ5 575 aaPredicted RBP9.91□□□□□ -0.82
DDX56-203ENST00000421223 AMELYQ99218 206 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 GTPBP2Q9BX10 602 aaKnown RBP9.91□□□□□ -0.82
DDX56-203ENST00000421223 TCF7L1Q9HCS4 588 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 CYSLTR2Q9NS75 346 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 RARRES3Q9UL19 164 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 AHCTF1Q8WYP5 2266 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 A0A0G2JK05 382 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 SMLR1H3BR10 107 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 OGG1O15527 345 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 TSPAN2O60636 221 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 AHSA1O95433 338 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 ADRB1P08588 477 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 HLA-DOBP13765 273 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 CFL1P23528 166 aaKnown RBP9.91□□□□□ -0.82
DDX56-203ENST00000421223 SLC6A8P48029 635 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 RPS11P62280 158 aaKnown RBP eCLIP9.91□□□□□ -0.82
DDX56-203ENST00000421223 DGCR2P98153 550 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 SNTA1Q13424 505 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 INPP5JQ15735 1006 aaPredicted RBP9.91□□□□□ -0.82
DDX56-203ENST00000421223 HLA-BQ31612 363 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 TMEM71Q6P5X7 295 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 FCRLAQ7L513 359 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 LINGO2Q7L985 606 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 MAMDC2Q7Z304 686 aaPredicted RBP9.91□□□□□ -0.82
DDX56-203ENST00000421223 TPRA1Q86W33 373 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 OR5AK2Q8NH90 309 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 KIAA1143Q96AT1 154 aaPredicted RBP9.91□□□□□ -0.82
DDX56-203ENST00000421223 ARL5BQ96KC2 179 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 C5orf34Q96MH7 638 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 OR2B2Q9GZK3 357 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 PCED1AQ9H1Q7 454 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 GAREM1Q9H706 876 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 TAS2R5Q9NYW4 299 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 MRM2Q9UI43 246 aaKnown RBP9.91□□□□□ -0.82
DDX56-203ENST00000421223 ALG5Q9Y673 324 aa9.91□□□□□ -0.82
DDX56-203ENST00000421223 TRAV36DV7A0A075B6V5 113 aa9.9□□□□□ -0.82
DDX56-203ENST00000421223 OR6C70A6NIJ9 312 aa9.9□□□□□ -0.82
DDX56-203ENST00000421223 NOTOA8MTQ0 251 aa9.9□□□□□ -0.82
DDX56-203ENST00000421223 ALG1L2C9J202 215 aa9.9□□□□□ -0.82
DDX56-203ENST00000421223 INMT-MINDY4F8WBC2 141 aa9.9□□□□□ -0.82
DDX56-203ENST00000421223 ZNF593O00488 134 aaPredicted RBP9.9□□□□□ -0.82
DDX56-203ENST00000421223 PIN1P1O15428 100 aa9.9□□□□□ -0.82
DDX56-203ENST00000421223 MPZL1O95297 269 aa9.9□□□□□ -0.82
DDX56-203ENST00000421223 TACSTD2P09758 323 aa9.9□□□□□ -0.82
DDX56-203ENST00000421223 GALNSP34059 522 aa9.9□□□□□ -0.82
DDX56-203ENST00000421223 EIF1AXP47813 144 aaKnown RBP9.9□□□□□ -0.82
DDX56-203ENST00000421223 DCAF7P61962 342 aa9.9□□□□□ -0.82
DDX56-203ENST00000421223 GPR176Q14439 515 aa9.9□□□□□ -0.82
DDX56-203ENST00000421223 OR7A5Q15622 319 aa9.9□□□□□ -0.82
DDX56-203ENST00000421223 C1orf140Q5VVS0 124 aa9.9□□□□□ -0.82
DDX56-203ENST00000421223 ARSKQ6UWY0 536 aa9.9□□□□□ -0.82
DDX56-203ENST00000421223 ADGRG3Q86Y34 549 aa9.9□□□□□ -0.82
DDX56-203ENST00000421223 SYS1Q8N2H4 156 aa9.9□□□□□ -0.82
DDX56-203ENST00000421223 OR51A4Q8NGJ6 313 aa9.9□□□□□ -0.82
DDX56-203ENST00000421223 UPRTQ96BW1 309 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms