RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 S100A11P31949 105 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 SEC61A1P61619 476 aaKnown RBP13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 TFF2Q03403 129 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 GPM6BQ13491 265 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 ITPRIPL2Q3MIP1 535 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 SLC35D3Q5M8T2 416 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 LINC01590Q5TEZ4 76 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 NPSR1Q6W5P4 371 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 LINC00114Q6XXX2 140 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 DPY19L4Q7Z388 723 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 GPAT4Q86UL3 456 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 SPICQ8N5J4 248 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 OR4C16Q8NGL9 310 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 SIPA1Q96FS4 1042 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 SCARF2Q96GP6 870 aaPredicted RBP13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 LMF1Q96S06 567 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 PPA2Q9H2U2 334 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 FAM60AQ9NP50 221 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 ZNF275Q9NSD4 429 aaPredicted RBP13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 ERVK-19Q9WJR5 959 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 TDRD6O60522 2096 aaKnown RBP13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 FAUP35544 74 aaKnown RBP13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 MELKQ14680 651 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 HLXQ14774 488 aaPredicted RBP13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 C4orf46Q504U0 113 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 EID2Q8N6I1 236 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 C3orf49Q96BT1 292 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 TRAV18A0A075B6X5 111 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 TCRBV16S1A1N1A0A5B0 115 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 SERINC4A6NH21 518 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 K7EQS6 105 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 EGFP01133 1207 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 CALCBP10092 127 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 CPN1P15169 458 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 COL9A1P20849 921 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 NTSR1P30989 418 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 H2BFSP57053 126 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 BTG2P78543 158 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 ALG10Q5BKT4 473 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 OLFML2AQ68BL7 652 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 SEZ6L2Q6UXD5 910 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 OOSP2Q86WS3 158 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 TSEN15Q8WW01 171 aaKnown RBP13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 PMM1Q92871 262 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 BMFQ96LC9 184 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 LRFN5Q96NI6 719 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 ELF4Q99607 663 aaPredicted RBP13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 RABL2AQ9UBK7 228 aaPredicted RBP13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 CPNE7Q9UBL6 633 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 PFDN2Q9UHV9 154 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 KIF25Q9UIL4 384 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 RABL2BQ9UNT1 228 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 ARPC3O15145 178 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 HLA-DQA2P01906 255 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 MAPK3P27361 379 aaPredicted RBP13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 KIR2DL1P43626 348 aaPredicted RBP13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 EFNB2P52799 333 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 DLX5P56178 289 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 RAB38P57729 211 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 PRPS1P60891 318 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 MRPS10P82664 201 aaKnown RBP13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 IKZF1Q13422 519 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 TMUB2Q71RG4 321 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 SLC51BQ86UW2 128 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 ZNF227Q86WZ6 799 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 SLC43A2Q8N370 569 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 OR51S1Q8NGJ8 323 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 PHOSPHO1Q8TCT1 267 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 HERVK_113Q902F9 699 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 SPDEFO95238 335 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 S1PR1P21453 382 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 TMEM81Q6P7N7 255 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 PARM1Q6UWI2 310 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 LRRC69Q6ZNQ3 347 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 OR6M1Q8NGM8 313 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 FGF14Q92915 247 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 LCORQ96JN0 433 aaPredicted RBP13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 VSTM2LQ96N03 204 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 NMNAT2Q9BZQ4 307 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 COMMD4Q9H0A8 199 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 WDR76Q9H967 626 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 GRHPRQ9UBQ7 328 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 KCNMB2Q9Y691 235 aa13.81□□□□□ -0.2
SEMA3B-203ENST00000419007 SPEGQ15772 3267 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 TGFBR3LH3BV60 316 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 GLSO94925 669 aaPredicted RBP13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 KDM4BO94953 1096 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 LPLP06858 475 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 NMBP08949 121 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 MAOAP21397 527 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 EPHA4P54764 986 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 RBMS2Q15434 407 aaKnown RBP13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 ALG11Q2TAA5 492 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 DCAF12L2Q5VW00 463 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 SLC6A19Q695T7 634 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 SLC16A9Q7RTY1 509 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 TCEAL2Q9H3H9 227 aaPredicted RBP13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 SFXN1Q9H9B4 322 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 EML5Q05BV3 1969 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 FANCMQ8IYD8 2048 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms