RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 LAD1O00515 517 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 RNF13O43567 381 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 TIMM8AO60220 97 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 SS18L1O75177 396 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 RETP07949 1114 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 RBMY1DP0C7P1 496 aaKnown RBP2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 RBMY1A1P0DJD3 496 aaKnown RBP2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 TDGF1P13385 188 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 CCDC130P13994 396 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 CPN2P22792 545 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 ANXA13P27216 316 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 FMO3P31513 532 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 HNRNPH3P31942 346 aaKnown RBP2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 CCT6AP40227 531 aaKnown RBP2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 MAGEA8P43361 318 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 CCT3P49368 545 aaKnown RBP2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 CEBPDP49716 269 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 TPMTP51580 245 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 TDGF1P3P51864 188 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 DOC2AQ14183 400 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 KIAA0087Q14695 138 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 SLC15A2Q16348 729 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 CARD16Q5EG05 197 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 PDZK1Q5T2W1 519 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 Q6ZPB1 254 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 NANOGNBQ7Z5D8 188 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 TMCO2Q7Z6W1 182 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 DHDDSQ86SQ9 333 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 ZNF695Q8IW36 515 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 IQCF2Q8IXL9 164 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 H1FOOQ8IZA3 346 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 UBE2J2Q8N2K1 259 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 BBOF1Q8ND07 529 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 FAM110BQ8TC76 370 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 HTR3CQ8WXA8 447 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 LRRC58Q96CX6 371 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 SH3YL1Q96HL8 342 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 TGM7Q96PF1 710 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 BPIFA3Q9BQP9 254 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 MTG1Q9BT17 334 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 CDC42EP4Q9H3Q1 356 aaKnown RBP2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 AZI2Q9H6S1 392 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 SGK2Q9HBY8 427 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 QPCTLQ9NXS2 382 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 SUN2Q9UH99 717 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 NUFIP1Q9UHK0 495 aaKnown RBP2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 ADAM28Q9UKQ2 775 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 PIK3R4Q99570 1358 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 TNIKQ9UKE5 1360 aa2.48□□□□□ -2.01
HMGB1P49-201ENST00000418882 DOCK9Q9BZ29 2069 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 A0A1B0GTQ1 180 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 A0A1B0GVL5 298 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 FAM240BA0A1B0GVZ2 78 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 ERVV-1B6SEH8 477 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 WRBO00258 174 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 RNF113AO15541 343 aaKnown RBP2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 NEMFO60524 1076 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 PFKFB2O60825 505 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 AGTP01019 485 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 GAPDHP04406 335 aaKnown RBP2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 ZNF823P16415 610 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 ATP5C1P36542 298 aaKnown RBP2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 FDFT1P37268 417 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 MAP3K8P41279 467 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 CDKN1BP46527 198 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 RPS5P46782 204 aaKnown RBP2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 NMUP48645 174 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 CLDN8P56748 225 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 SPAG1Q07617 926 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 FGL1Q08830 312 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 ATP6AP1Q15904 470 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 TATDN3Q17R31 274 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 PARP15Q460N3 678 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 CTSL3PQ5NE16 218 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 GPR157Q5UAW9 335 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 OR2A2Q6IF42 318 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 FRMPD2BQ6IN97 320 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 GDPD3Q7L5L3 318 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 EGFL6Q8IUX8 553 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 NECAB1Q8N987 351 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 DRAXINQ8NBI3 349 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 SDR9C7Q8NEX9 313 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 BPIFCQ8NFQ6 507 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 OR4D5Q8NGN0 318 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 OR1L4Q8NGR5 311 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 SCFD1Q8WVM8 642 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 TMIGD2Q96BF3 282 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 TM4SF19Q96DZ7 209 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 ITCHQ96J02 903 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 C12orf42Q96LP6 360 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 OMDQ99983 421 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 TMEM246Q9BRR3 403 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 PKIBQ9C010 78 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 ROGDIQ9GZN7 287 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 SRMSQ9H3Y6 488 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 CLSTN2Q9H4D0 955 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 SEC14L3Q9UDX4 400 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 PIGLQ9Y2B2 252 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 POLDIP2Q9Y2S7 368 aa2.47□□□□□ -2.01
HMGB1P49-201ENST00000418882 SLIT3O75094 1523 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms