RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 EVI2BP34910 448 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 NFATC3Q12968 1075 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 SMAD4Q13485 552 aaKnown RBP10.37□□□□□ -0.75
PTCH1-205ENST00000418258 KCNJ8Q15842 424 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 GDPGP1Q6ZNW5 385 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 RFLNAQ6ZTI6 216 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 OR7G1Q8NGA0 311 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 LIPHQ8WWY8 451 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 TMEM221A6NGB7 291 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 PRKRAO75569 313 aaKnown RBP10.37□□□□□ -0.75
PTCH1-205ENST00000418258 RAB40ALP0C0E4 278 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 C2orf76Q3KRA6 126 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 FJX1Q86VR8 437 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 BEST4Q8NFU0 473 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 RAB40AQ8WXH6 277 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 OR51J1Q9H342 316 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 GLTPQ9NZD2 209 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 WDR37Q9Y2I8 494 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 MRPS28Q9Y2Q9 187 aaKnown RBP10.37□□□□□ -0.75
PTCH1-205ENST00000418258 C4orf47A7E2U8 309 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 BOLA2-SMG1P6H3BVE0 249 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 GABRPO00591 440 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 FZD7O75084 574 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 Q6ZTK2 550 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 WFDC8Q8IUA0 241 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 SLC22A12Q96S37 553 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 H3BMQ9 156 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 UBCP0CG48 685 aaKnown RBP10.36□□□□□ -0.75
PTCH1-205ENST00000418258 LEXMQ3ZCV2 418 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 GJC3Q8NFK1 279 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 EGLN2Q96KS0 407 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 SLC30A3Q99726 388 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 MOKQ9UQ07 419 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 PRAF2O60831 178 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 UPK1BO75841 260 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 GASTP01350 101 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 SIX1Q15475 284 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-205ENST00000418258 NANPQ8TBE9 248 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 ABHD6Q9BV23 337 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 BIN3Q9NQY0 253 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 H0Y8G0 127 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 NSA2O95478 260 aaKnown RBP10.36□□□□□ -0.75
PTCH1-205ENST00000418258 PTTG1O95997 202 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 MGST1P10620 155 aaKnown RBP10.36□□□□□ -0.75
PTCH1-205ENST00000418258 ITGAMP11215 1152 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 RPA2P15927 270 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 MAKP20794 623 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 SERPINF1P36955 418 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 ZNF691Q5VV52 312 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 MBOAT2Q6ZWT7 520 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 ZFP82Q8N141 532 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 BATF2Q8N1L9 274 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 ZPBPQ9BS86 351 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 IER2Q9BTL4 223 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 PGAP2Q9UHJ9 254 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 K7EPK0 472 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 APEHP13798 732 aaKnown RBP10.36□□□□□ -0.75
PTCH1-205ENST00000418258 RAC1P63000 192 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 RNF4P78317 190 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 CLVS2Q5SYC1 327 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 CNTN4Q8IWV2 1026 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 FAM71E2Q8N5Q1 922 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 SLC35G3Q8N808 338 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 SLC35A4Q96G79 324 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 C3orf30Q96M34 536 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 TNFRSF13CQ96RJ3 184 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 RIMS4Q9H426 269 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-205ENST00000418258 FBXO24O75426 580 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 APOA2P02652 100 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 NFYAP23511 347 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-205ENST00000418258 EMP3P54852 163 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 GALEQ14376 348 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 RPL22L1Q6P5R6 122 aaKnown RBP10.36□□□□□ -0.75
PTCH1-205ENST00000418258 B3GLCTQ6Y288 498 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 ZNF546Q86UE3 836 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 SAV1Q9H4B6 383 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-205ENST00000418258 PRDM4Q9UKN5 801 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 NRAPQ86VF7 1730 aa10.36□□□□□ -0.75
PTCH1-205ENST00000418258 P2RY10O00398 339 aa10.35□□□□□ -0.75
PTCH1-205ENST00000418258 ATXN1LP0C7T5 689 aaKnown RBP10.35□□□□□ -0.75
PTCH1-205ENST00000418258 ZNF728P0DKX0 622 aa10.35□□□□□ -0.75
PTCH1-205ENST00000418258 SLC35A2P78381 396 aa10.35□□□□□ -0.75
PTCH1-205ENST00000418258 MS4A2Q01362 244 aa10.35□□□□□ -0.75
PTCH1-205ENST00000418258 HACD4Q5VWC8 232 aa10.35□□□□□ -0.75
PTCH1-205ENST00000418258 WDR5BQ86VZ2 330 aa10.35□□□□□ -0.75
PTCH1-205ENST00000418258 PM20D2Q8IYS1 436 aa10.35□□□□□ -0.75
PTCH1-205ENST00000418258 OR6V1Q8N148 313 aa10.35□□□□□ -0.75
PTCH1-205ENST00000418258 SLC15A4Q8N697 577 aa10.35□□□□□ -0.75
PTCH1-205ENST00000418258 OR13C9Q8NGT0 318 aa10.35□□□□□ -0.75
PTCH1-205ENST00000418258 PDXPQ96GD0 296 aa10.35□□□□□ -0.75
PTCH1-205ENST00000418258 DCLRE1CQ96SD1 692 aaKnown RBP10.35□□□□□ -0.75
PTCH1-205ENST00000418258 LUZP4Q9P127 313 aa10.35□□□□□ -0.75
PTCH1-205ENST00000418258 ACOD1A6NK06 481 aa10.35□□□□□ -0.75
PTCH1-205ENST00000418258 UBE2G2P60604 165 aa10.35□□□□□ -0.75
PTCH1-205ENST00000418258 GLYR1Q49A26 553 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-205ENST00000418258 LPCAT3Q6P1A2 487 aa10.35□□□□□ -0.75
PTCH1-205ENST00000418258 ZNF582Q96NG8 517 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-205ENST00000418258 ASB16Q96NS5 453 aa10.35□□□□□ -0.75
PTCH1-205ENST00000418258 ZNF318Q5VUA4 2279 aa10.35□□□□□ -0.75
PTCH1-205ENST00000418258 MKRN2OSH3BPM6 223 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms