RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 RPL18Q07020 188 aaKnown RBP13.16□□□□□ -0.3
HDAC9-208ENST00000417496 ALKBH1Q13686 389 aaKnown RBP13.16□□□□□ -0.3
HDAC9-208ENST00000417496 MESTQ5EB52 335 aa13.16□□□□□ -0.3
HDAC9-208ENST00000417496 SEZ6L2Q6UXD5 910 aa13.16□□□□□ -0.3
HDAC9-208ENST00000417496 NHLRC1Q6VVB1 395 aa13.16□□□□□ -0.3
HDAC9-208ENST00000417496 SLC16A9Q7RTY1 509 aa13.16□□□□□ -0.3
HDAC9-208ENST00000417496 DND1Q8IYX4 353 aaKnown RBP13.16□□□□□ -0.3
HDAC9-208ENST00000417496 LRRC75AQ8NAA5 344 aa13.16□□□□□ -0.3
HDAC9-208ENST00000417496 RPS4Y2Q8TD47 263 aa13.16□□□□□ -0.3
HDAC9-208ENST00000417496 TMEM106AQ96A25 262 aa13.16□□□□□ -0.3
HDAC9-208ENST00000417496 C1QTNF6Q9BXI9 259 aa13.16□□□□□ -0.3
HDAC9-208ENST00000417496 PNO1Q9NRX1 252 aaKnown RBP13.16□□□□□ -0.3
HDAC9-208ENST00000417496 GRHPRQ9UBQ7 328 aa13.16□□□□□ -0.3
HDAC9-208ENST00000417496 CYP8B1Q9UNU6 501 aa13.16□□□□□ -0.3
HDAC9-208ENST00000417496 SPTY2D1-AS1A0A0U1RR47 76 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 C17orf105B2RV13 164 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 RGS11O94810 467 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 PDGFAP04085 211 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 CLPSP04118 112 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 HOXD11P31277 338 aaPredicted RBP13.15□□□□□ -0.3
HDAC9-208ENST00000417496 EFNB2P52799 333 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 TAS2R20P59543 309 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 UBE2MP61081 183 aaKnown RBP13.15□□□□□ -0.3
HDAC9-208ENST00000417496 FUT7Q11130 342 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 CBFBQ13951 182 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 FAM69AQ5T7M9 428 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 FAM220AQ7Z4H9 259 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 EXD3Q8N9H8 876 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 OR4D10Q8NGI6 311 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 HAVCR1Q96D42 359 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 ADOQ96SZ5 270 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 NXF5Q9H1B4 397 aaKnown RBP13.15□□□□□ -0.3
HDAC9-208ENST00000417496 PLEKHA1Q9HB21 404 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 PIPOXQ9P0Z9 390 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 LAMP5Q9UJQ1 280 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 MRPS33Q9Y291 106 aaKnown RBP13.15□□□□□ -0.3
HDAC9-208ENST00000417496 HIF3AQ9Y2N7 669 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 WDFY3Q8IZQ1 3526 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 ANKRD20A5PA0PJZ0 165 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 FAM221BA6H8Z2 402 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 C11orf98E9PRG8 122 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 ABHD16AO95870 558 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 TGM6O95932 706 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 SDHAP31040 664 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 RABIFP47224 123 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 SKP2Q13309 424 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 TOMM34Q15785 309 aaPredicted RBP13.15□□□□□ -0.3
HDAC9-208ENST00000417496 SMUG1Q53HV7 270 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 WBP2NLQ6ICG8 309 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 SLC35D2Q76EJ3 337 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 LRRTM1Q86UE6 522 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 ZNF595Q8IYB9 648 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 FAM160A2Q8N612 972 aaPredicted RBP13.15□□□□□ -0.3
HDAC9-208ENST00000417496 DEFB119Q8N690 84 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 ZNF676Q8N7Q3 588 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 UXS1Q8NBZ7 420 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 RLN3Q8WXF3 142 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 TAAR8Q969N4 342 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 CCDC74AQ96AQ1 378 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 TSPAN32Q96QS1 320 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 GAL3ST1Q99999 423 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 NPDC1Q9NQX5 325 aaPredicted RBP13.15□□□□□ -0.3
HDAC9-208ENST00000417496 NPTNQ9Y639 398 aa13.15□□□□□ -0.3
HDAC9-208ENST00000417496 M0R233 179 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 ZNF749O43361 778 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 SIX6O95475 246 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 ECDO95905 644 aaPredicted RBP13.14□□□□□ -0.31
HDAC9-208ENST00000417496 PLGP00747 810 aaPredicted RBP13.14□□□□□ -0.31
HDAC9-208ENST00000417496 TACSTD2P09758 323 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 UBL4AP11441 157 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 TACR3P29371 465 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 COMMD7Q86VX2 200 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 PM20D2Q8IYS1 436 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 SIX5Q8N196 739 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 MEIOBQ8N635 442 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 OR51D1Q8NGF3 324 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 ZNF563Q8TA94 476 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 PHYHIPQ92561 330 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 NSMAFQ92636 917 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 TOE1Q96GM8 510 aaKnown RBP13.14□□□□□ -0.31
HDAC9-208ENST00000417496 GPX7Q96SL4 187 aaPredicted RBP13.14□□□□□ -0.31
HDAC9-208ENST00000417496 OR8D2Q9GZM6 311 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 S1PR5Q9H228 398 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 ANXA2P2A6NMY6 339 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 PRAMEF26H0Y7S4 382 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 ANXA2P07355 339 aaKnown RBP13.14□□□□□ -0.31
HDAC9-208ENST00000417496 IFI6P09912 130 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 ASAH2BP0C7U1 165 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 CXCL2P19875 107 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 GUCA2AQ02747 115 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 IL10RAQ13651 578 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 PRAMEF17Q5VTA0 474 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 METTL11BQ5VVY1 283 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 GLDNQ6ZMI3 551 aaPredicted RBP13.14□□□□□ -0.31
HDAC9-208ENST00000417496 CHMP1BQ7LBR1 199 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 PRSS35Q8N3Z0 413 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 OR2G2Q8NGZ5 317 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 MIB2Q96AX9 1013 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 MRPL48Q96GC5 212 aaKnown RBP13.14□□□□□ -0.31
HDAC9-208ENST00000417496 MSANTD3Q96H12 275 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms