RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 STK35Q8TDR2 534 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 ADAD1Q96M93 576 aaKnown RBP8.92□□□□□ -0.98
CD44-206ENST00000415148 NKX3-1Q99801 234 aaPredicted RBP8.92□□□□□ -0.98
CD44-206ENST00000415148 SHARPINQ9H0F6 387 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 SLC6A17Q9H1V8 727 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 TSPAN10Q9H1Z9 355 aaPredicted RBP8.92□□□□□ -0.98
CD44-206ENST00000415148 PPA2Q9H2U2 334 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 CAPN10Q9HC96 672 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 HRASLS2Q9NWW9 162 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 FBXL2Q9UKC9 423 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 HIF3AQ9Y2N7 669 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 A0A1B0GTH9 108 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 A0A1W2PQF6 199 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 OR5K4A6NMS3 321 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 XRCC3O43542 346 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 GLSO94925 669 aaPredicted RBP8.92□□□□□ -0.98
CD44-206ENST00000415148 PVRP15151 417 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 ZP3P21754 424 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 CDK2P24941 298 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 CDKN2AP42771 156 aaKnown RBP8.92□□□□□ -0.98
CD44-206ENST00000415148 H2BFSP57053 126 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 TAS2R20P59543 309 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 ERVK-25P63136 954 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 SKP1P63208 163 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 HLXQ14774 488 aaPredicted RBP8.92□□□□□ -0.98
CD44-206ENST00000415148 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.92□□□□□ -0.98
CD44-206ENST00000415148 WBP2NLQ6ICG8 309 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 OR7E24Q6IFN5 339 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 LEG1Q6P5S2 330 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 FAM122BQ7Z309 247 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 LRRTM1Q86UE6 522 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 JAZF1Q86VZ6 243 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 SDR16C5Q8N3Y7 309 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 ARHGEF39Q8N4T4 335 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 LRRC75AQ8NAA5 344 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 OR4D10Q8NGI6 311 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 ZNF417Q8TAU3 575 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 ADAMTS18Q8TE60 1221 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 ASB13Q8WXK3 278 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 C3orf49Q96BT1 292 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 RASD2Q96D21 266 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 CCDC3Q9BQI4 270 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 EXOSC3Q9NQT5 275 aaKnown RBP8.92□□□□□ -0.98
CD44-206ENST00000415148 CPNE7Q9UBL6 633 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 CACNA1CQ13936 2221 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 ANXA2P2A6NMY6 339 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 CHURC1-FNTBB4DL54 471 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 L7N2F9 121 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 ARPC5O15511 151 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 RDH16O75452 317 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 RBBP9O75884 186 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 TSPAN9O75954 239 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 CD14P08571 375 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 CT45A8P0DMV1 189 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 CT45A9P0DMV2 189 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 CALCRP30988 508 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 SDHAP31040 664 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 UBE2IP63279 158 aaKnown RBP8.91□□□□□ -0.98
CD44-206ENST00000415148 EGR3Q06889 387 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 CBFBQ13951 182 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 FAM53BQ14153 422 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 KCNAB1Q14722 419 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 ALG11Q2TAA5 492 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 KLHL26Q53HC5 615 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 CT45A2Q5DJT8 189 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 DCAF12L2Q5VW00 463 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 B3GNTL1Q67FW5 361 aaPredicted RBP8.91□□□□□ -0.98
CD44-206ENST00000415148 NPSR1Q6W5P4 371 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 OOSP2Q86WS3 158 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 CDC20BQ86Y33 519 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 GLB1L2Q8IW92 636 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 GPBAR1Q8TDU6 330 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 KXD1Q9BQD3 176 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 FRRS1LQ9P0K9 344 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 GPR160Q9UJ42 338 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 MRPS33Q9Y291 106 aaKnown RBP8.91□□□□□ -0.98
CD44-206ENST00000415148 HEATR5AQ86XA9 2040 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 MPDZO75970 2070 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 TRBV5-7A0A0A0MS05 114 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 KIR2DS5A0A0G2JLQ3 304 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 A0A0G2JNG1 304 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 A0A1B0GVT2 93 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 H0Y8X5 98 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 H7C417 338 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 PYCARD-AS1I3L0S3 204 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 KIR2DS3K7RE56 304 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 PHYHO14832 338 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 HIST1H2ABP04908 130 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 CSF1P09603 554 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 RNH1P13489 461 aaKnown RBP8.91□□□□□ -0.98
CD44-206ENST00000415148 HOXB2P14652 356 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 GALNSP34059 522 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 NUP62P37198 522 aaPredicted RBP8.91□□□□□ -0.98
CD44-206ENST00000415148 GPR3P46089 330 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 ARHGDIBP52566 201 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 DLX5P56178 289 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 SSBP1Q04837 148 aaKnown RBP8.91□□□□□ -0.98
CD44-206ENST00000415148 ZNF273Q14593 569 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 KIR2DS5Q14953 304 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 RBMS2Q15434 407 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms