RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 VDAC3Q9Y277 283 aa11.93□□□□□ -0.5
RAPGEF1-204ENST00000414781 MED31Q9Y3C7 131 aa11.93□□□□□ -0.5
RAPGEF1-204ENST00000414781 LYVE1Q9Y5Y7 322 aa11.93□□□□□ -0.5
RAPGEF1-204ENST00000414781 U3KQV3 271 aa11.93□□□□□ -0.5
RAPGEF1-204ENST00000414781 TRRAPQ9Y4A5 3859 aa11.93□□□□□ -0.5
RAPGEF1-204ENST00000414781 TMED7-TICAM2A0A0A6YYA0 188 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 TMEM89A2RUT3 159 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 ARRDC5A6NEK1 342 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 A8MVM7 634 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 ZIC3O60481 467 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 NTN1O95631 604 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 ANXA8P13928 327 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 ZNF23P17027 643 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 ELK4P28324 431 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 SRP14P37108 136 aaKnown RBP11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 TRIP10Q15642 601 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 MICAQ29983 383 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 CR1LQ2VPA4 569 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 MIDNQ504T8 468 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 RAET1LQ5VY80 246 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 MBOAT2Q6ZWT7 520 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 STK32CQ86UX6 486 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 LILRA2Q8N149 483 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 LRRC17Q8N6Y2 441 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 ZNF525Q8N782 197 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 ICA1LQ8NDH6 482 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 SLC7A13Q8TCU3 470 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 STK35Q8TDR2 534 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 GIPC3Q8TF64 312 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 TMEM239Q8WW34 195 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 NEUROG1Q92886 237 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 DDIT4LQ96D03 193 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 MSI2Q96DH6 328 aaKnown RBP11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 SEMA6AQ9H2E6 1030 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 VCXQ9H320 206 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 ZNF556Q9HAH1 456 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 NTN4Q9HB63 628 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 CHRNA9Q9UGM1 479 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 TMEM5Q9Y2B1 443 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 TMED7Q9Y3B3 224 aa11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 PRKDCP78527 4128 aaKnown RBP11.92□□□□□ -0.5
RAPGEF1-204ENST00000414781 MALRD1Q5VYJ5 2156 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 SH3PXD2BA1X283 911 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 C17orf51A8MQB3 221 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 OR2T1O43869 369 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 OR10H3O60404 316 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 IGF2P01344 180 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 LIMS1P48059 325 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 FOXF1Q12946 379 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 SELENBP1Q13228 472 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 RAB35Q15286 201 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 TAF11Q15544 211 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 TMEM44Q2T9K0 475 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 ZBTB49Q6ZSB9 765 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 ADGRG3Q86Y34 549 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 UBQLNLQ8IYU4 475 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 SEMA6DQ8NFY4 1073 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 KBTBD8Q8NFY9 601 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 OR4C15Q8NGM1 316 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 FNDC9Q8TBE3 224 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 PIGXQ8TBF5 258 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 DNAJC9Q8WXX5 260 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 PRSS27Q9BQR3 290 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 ZNF426Q9BUY5 554 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 CACNG6Q9BXT2 260 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 HDHD5Q9BXW7 423 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 MAN2C1Q9NTJ4 1040 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 CISD1Q9NZ45 108 aaKnown RBP11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 PDP1Q9P0J1 537 aaPredicted RBP11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 MGAT4BQ9UQ53 548 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 AP4B1Q9Y6B7 739 aa11.91□□□□□ -0.5
RAPGEF1-204ENST00000414781 A0A087WUU8 490 aa11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 TRBV4-1A0A0J9YWV2 114 aa11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 CASQ2O14958 399 aaPredicted RBP11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 LYPD3O95274 346 aa11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 THY1P04216 161 aa11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 IL11P20809 199 aa11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 GSTM3P21266 225 aa11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 RAC1P63000 192 aa11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 COX10Q12887 443 aa11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 MFSD13AQ14CX5 517 aa11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 SNCBQ16143 134 aa11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 PDSS1Q5T2R2 415 aa11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 ALKBH2Q6NS38 261 aa11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 C3orf33Q6P1S2 294 aa11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 TSPYL5Q86VY4 417 aaPredicted RBP11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 NKAIN4Q8IVV8 208 aa11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 PACRGLQ8N7B6 248 aa11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 OR10G2Q8NGC3 310 aa11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 OR4K5Q8NGD3 323 aa11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 OR6S1Q8NH40 331 aa11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 TMEM255BQ8WV15 326 aa11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 RBM4BQ9BQ04 359 aaKnown RBP11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 USB1Q9BQ65 265 aaKnown RBP11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 PSD2Q9BQI7 771 aa11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 FUZQ9BT04 418 aa11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 RBM4Q9BWF3 364 aaKnown RBP11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 POTEKPQ9BYX7 375 aa11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 NKX1-2Q9UD57 310 aaPredicted RBP11.9□□□□□ -0.5
RAPGEF1-204ENST00000414781 ENOPH1Q9UHY7 261 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms