RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 RWDD2AQ9UIY3 292 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 AK6Q9Y3D8 172 aaKnown RBP2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 ABCB11O95342 1321 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 PHLPP2Q6ZVD8 1323 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 MYLKQ15746 1914 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 IGKV6D-21A0A0A0MT36 114 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 A0A1B0GUA9 196 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 VSTM2BA6NLU5 285 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 A8MUA0 341 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 RSPH10B2B2RC85 870 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 GOLGA6L19H0YKK7 550 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 MPHOSPH10O00566 681 aaKnown RBP2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 TRAF3IP2O43734 574 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 NPIPB7O75200 414 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 LRATO95237 230 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 SMC2O95347 1197 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 LGALS2P05162 132 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 PTMAP06454 111 aaKnown RBP2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 TPM3P06753 285 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 TPM2P07951 284 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 RSPH10BP0C881 870 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 KRT13P13646 458 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 GNA11P29992 359 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 PRDX3P30048 256 aaKnown RBP2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 OTX2P32243 289 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 CHI3L1P36222 383 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 CCT6AP40227 531 aaKnown RBP2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 P2RY1P47900 373 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 DAP3P51398 398 aaKnown RBP2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 POLR2FP61218 127 aaKnown RBP2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 RPS14P62263 151 aaKnown RBP2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 NCBP1Q09161 790 aaKnown RBP2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 ITGB3BPQ13352 177 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 NSDHLQ15738 373 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 TPD52L1Q16890 204 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 SLC25A52Q3SY17 297 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 USH1GQ495M9 461 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 CENPPQ6IPU0 288 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 WDR59Q6PJI9 974 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 DAW1Q8N136 415 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 CLEC4FQ8N1N0 589 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 ZNF740Q8NDX6 193 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 CATSPER1Q8NEC5 780 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 CCDC12Q8WUD4 166 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 SCFD1Q8WVM8 642 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 ANKRD7Q92527 254 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 TBX15Q96SF7 602 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 MBOAT4Q96T53 435 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 HIST1H4GQ99525 98 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 SDHCQ99643 169 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 SPATA16Q9BXB7 569 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 NXF3Q9H4D5 531 aaKnown RBP2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 AIG1Q9NVV5 245 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 CHRNA9Q9UGM1 479 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 KIF25Q9UIL4 384 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 UBIAD1Q9Y5Z9 338 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 MYO16Q9Y6X6 1858 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 KIAA1671Q9BY89 1806 aa2.45□□□□□ -2.02
HMGB1P11-201ENST00000413899 IGSF9BQ9UPX0 1349 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 SCN10AQ9Y5Y9 1956 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 IGHV3OR16-13A0A075B7E8 117 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 PVALEFA0A1B0GWK0 134 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 MBLAC1A4D2B0 266 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 TMEM150BA6NC51 233 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 TRDCB7Z8K6 153 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 GFYI3L273 518 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 OR10H3O60404 316 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 NOL3O60936 208 aaKnown RBP2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 PEX11AO75192 247 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 CNMDO75829 334 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 CCNE2O96020 404 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 IGHV4-34P06331 123 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 PLEKP08567 350 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 PSG2P11465 335 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 POLR2EP19388 210 aaKnown RBP2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 UQCRC2P22695 453 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 PAX7P23759 505 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 COX7A1P24310 79 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 MMP11P24347 488 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 RPS12P25398 132 aaKnown RBP2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 HNRNPH3P31942 346 aaKnown RBP2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 CASP14P31944 242 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 SOX6P35712 828 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 NUDT1P36639 197 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 BIDP55957 195 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 ZNF763Q0D2J5 394 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 ELP6Q0PNE2 266 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 SNTB2Q13425 540 aaKnown RBP2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 PDK4Q16654 411 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 TRIM16LQ309B1 348 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 NSUN5P1Q3KNT7 163 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 NADK2Q4G0N4 442 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 TP53I3Q53FA7 332 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 C1orf220Q5T0J3 134 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 SPECC1LQ69YQ0 1117 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 Q6P435 159 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 RNF165Q6ZSG1 346 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 Q8N9L7 120 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 OR51S1Q8NGJ8 323 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 OR1F12Q8NHA8 337 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms