RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 ZNF627Q7L945 461 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 LRP11Q86VZ4 500 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 OR6N1Q8NGY5 312 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 SGMS2Q8NHU3 365 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 MAL2Q969L2 176 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 VPS33AQ96AX1 596 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 ZNF75AQ96N20 296 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 EPYCQ99645 322 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 ZNF416Q9BWM5 594 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 ASPNQ9BXN1 380 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 ULBP2Q9BZM5 246 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 RAD21L1Q9H4I0 556 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 A4GALTQ9NPC4 353 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 ZNF275Q9NSD4 429 aaPredicted RBP14.35□□□□□ -0.11
MRPL55-220ENST00000411464 SELENONQ9NZV5 590 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 KLHL14Q9P2G3 628 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 FBXL3Q9UKT7 428 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 ZNF346Q9UL40 294 aaKnown RBP14.35□□□□□ -0.11
MRPL55-220ENST00000411464 IGKV1D-42A0A075B6H8 117 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 A0A087WUJ7 227 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 TRAV20A0A0B4J274 112 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 A0A1W2PPW3 197 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 TRIM77I1YAP6 450 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 WNT9BO14905 357 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 HPRP00739 348 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 KITP10721 976 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 NAT2P11245 290 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 B4GALT1P15291 398 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 SELENOVP59797 346 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 MYBPC1Q00872 1141 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 PMS2P3Q13401 168 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 FXNQ16595 210 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 GLIPR1L2Q4G1C9 344 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 HHATQ5VTY9 493 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 ULK3Q6PHR2 472 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 OR6S1Q8NH40 331 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 FAM216AQ8WUB2 273 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 SLC47A1Q96FL8 570 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 SLC41A3Q96GZ6 507 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 TXNDC15Q96J42 360 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 FOXB1Q99853 325 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 THAP1Q9NVV9 213 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 MED29Q9NX70 200 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 ZIM2Q9NZV7 527 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 GPR160Q9UJ42 338 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 TENM1Q9UKZ4 2725 aa14.34□□□□□ -0.11
MRPL55-220ENST00000411464 TMEM89A2RUT3 159 aa14.33□□□□□ -0.12
MRPL55-220ENST00000411464 CLIC1O00299 241 aa14.33□□□□□ -0.12
MRPL55-220ENST00000411464 UBL3O95164 117 aa14.33□□□□□ -0.12
MRPL55-220ENST00000411464 PNPP00491 289 aa14.33□□□□□ -0.12
MRPL55-220ENST00000411464 ETS2P15036 469 aa14.33□□□□□ -0.12
MRPL55-220ENST00000411464 AHCYP23526 432 aa14.33□□□□□ -0.12
MRPL55-220ENST00000411464 HTR2AP28223 471 aa14.33□□□□□ -0.12
MRPL55-220ENST00000411464 PRKAR1BP31321 381 aa14.33□□□□□ -0.12
MRPL55-220ENST00000411464 POLR2JP52435 117 aaKnown RBP14.33□□□□□ -0.12
MRPL55-220ENST00000411464 LMO4P61968 165 aa14.33□□□□□ -0.12
MRPL55-220ENST00000411464 FADDQ13158 208 aa14.33□□□□□ -0.12
MRPL55-220ENST00000411464 CAMK2DQ13557 499 aa14.33□□□□□ -0.12
MRPL55-220ENST00000411464 RAB39AQ14964 217 aa14.33□□□□□ -0.12
MRPL55-220ENST00000411464 FAM91A1Q658Y4 838 aa14.33□□□□□ -0.12
MRPL55-220ENST00000411464 USP43Q70EL4 1123 aa14.33□□□□□ -0.12
MRPL55-220ENST00000411464 PEG10Q86TG7 708 aaKnown RBP14.33□□□□□ -0.12
MRPL55-220ENST00000411464 MIER2Q8N344 545 aa14.33□□□□□ -0.12
MRPL55-220ENST00000411464 C10orf53Q8N6V4 93 aa14.33□□□□□ -0.12
MRPL55-220ENST00000411464 SCAIQ8N9R8 606 aa14.33□□□□□ -0.12
MRPL55-220ENST00000411464 YIPF5Q969M3 257 aa14.33□□□□□ -0.12
MRPL55-220ENST00000411464 JMJD8Q96S16 334 aa14.33□□□□□ -0.12
MRPL55-220ENST00000411464 ZNF385DQ9H6B1 395 aa14.33□□□□□ -0.12
MRPL55-220ENST00000411464 SDR39U1Q9NRG7 319 aaPredicted RBP14.33□□□□□ -0.12
MRPL55-220ENST00000411464 MYEF2Q9P2K5 600 aaKnown RBP14.33□□□□□ -0.12
MRPL55-220ENST00000411464 SLC7A8Q9UHI5 535 aa14.33□□□□□ -0.12
MRPL55-220ENST00000411464 EGR1P18146 543 aa14.32□□□□□ -0.12
MRPL55-220ENST00000411464 EPHA1P21709 976 aa14.32□□□□□ -0.12
MRPL55-220ENST00000411464 HILS1P60008 231 aa14.32□□□□□ -0.12
MRPL55-220ENST00000411464 NCALDP61601 193 aa14.32□□□□□ -0.12
MRPL55-220ENST00000411464 PUDPQ08623 228 aa14.32□□□□□ -0.12
MRPL55-220ENST00000411464 NKPD1Q17RQ9 610 aa14.32□□□□□ -0.12
MRPL55-220ENST00000411464 ACSM5Q6NUN0 579 aa14.32□□□□□ -0.12
MRPL55-220ENST00000411464 KRT73Q86Y46 540 aa14.32□□□□□ -0.12
MRPL55-220ENST00000411464 SPATA5L1Q9BVQ7 753 aa14.32□□□□□ -0.12
MRPL55-220ENST00000411464 RBM4Q9BWF3 364 aaKnown RBP14.32□□□□□ -0.12
MRPL55-220ENST00000411464 TMEM27Q9HBJ8 222 aa14.32□□□□□ -0.12
MRPL55-220ENST00000411464 ZNF224Q9NZL3 707 aa14.32□□□□□ -0.12
MRPL55-220ENST00000411464 UBDO15205 165 aa14.31□□□□□ -0.12
MRPL55-220ENST00000411464 SERPINI2O75830 405 aa14.31□□□□□ -0.12
MRPL55-220ENST00000411464 NCR1O76036 304 aa14.31□□□□□ -0.12
MRPL55-220ENST00000411464 BGLAPP02818 100 aa14.31□□□□□ -0.12
MRPL55-220ENST00000411464 SERPINA5P05154 406 aa14.31□□□□□ -0.12
MRPL55-220ENST00000411464 BMP2P12643 396 aa14.31□□□□□ -0.12
MRPL55-220ENST00000411464 ALKBH6Q3KRA9 238 aa14.31□□□□□ -0.12
MRPL55-220ENST00000411464 RGS7BPQ6MZT1 257 aaPredicted RBP14.31□□□□□ -0.12
MRPL55-220ENST00000411464 TMEM154Q6P9G4 183 aa14.31□□□□□ -0.12
MRPL55-220ENST00000411464 PIWIL3Q7Z3Z3 882 aaKnown RBP14.31□□□□□ -0.12
MRPL55-220ENST00000411464 PXKQ7Z7A4 578 aa14.31□□□□□ -0.12
MRPL55-220ENST00000411464 MREGQ8N565 214 aa14.31□□□□□ -0.12
MRPL55-220ENST00000411464 ANKRD42Q8N9B4 389 aa14.31□□□□□ -0.12
MRPL55-220ENST00000411464 GTF2H4Q92759 462 aa14.31□□□□□ -0.12
MRPL55-220ENST00000411464 SLC52A3Q9NQ40 469 aa14.31□□□□□ -0.12
MRPL55-220ENST00000411464 MRPL39Q9NYK5 338 aaKnown RBP14.31□□□□□ -0.12
MRPL55-220ENST00000411464 SLC22A23A1A5C7 686 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms