RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 TSPAN32Q96QS1 320 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 KCNJ15Q99712 375 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 POTEKPQ9BYX7 375 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 TIGARQ9NQ88 270 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 TAS2R5Q9NYW4 299 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 VSX1Q9NZR4 365 aaPredicted RBP12.29□□□□□ -0.44
LIMS1-205ENST00000410093 LAMA1P25391 3075 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 SHISA3A0PJX4 238 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 FAM25AB3EWG3 89 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 FAM25CB3EWG5 89 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 FAM25GB3EWG6 89 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 FZD7O75084 574 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 TPPPO94811 219 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 RAF1P04049 648 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 MYF5P13349 255 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 PRKCAP17252 672 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 SHC1P29353 583 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 CRABP1P29762 137 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 ACVR1BP36896 505 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 DAB2P98082 770 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 IL18Q14116 193 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 COL28A1Q2UY09 1125 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 HSD17B12Q53GQ0 312 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 SLC25A53Q5H9E4 307 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 MRPL14Q6P1L8 145 aaKnown RBP12.28□□□□□ -0.44
LIMS1-205ENST00000410093 DNM1P34Q6PK57 102 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 SSX6Q7RTT6 188 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 EID2Q8N6I1 236 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 AGBL5Q8NDL9 886 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 DEFB124Q8NES8 71 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 IL17RDQ8NFM7 739 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 DUSP19Q8WTR2 217 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 DDIT4LQ96D03 193 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 ADAD1Q96M93 576 aaKnown RBP12.28□□□□□ -0.44
LIMS1-205ENST00000410093 INTS14Q96SY0 518 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 CRB3Q9BUF7 120 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 PTDSS2Q9BVG9 487 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 GPN3Q9UHW5 284 aaPredicted RBP12.28□□□□□ -0.44
LIMS1-205ENST00000410093 LAMP5Q9UJQ1 280 aa12.28□□□□□ -0.44
LIMS1-205ENST00000410093 ZNF346Q9UL40 294 aaKnown RBP12.28□□□□□ -0.44
LIMS1-205ENST00000410093 A0A1W2PRG6 482 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 TMEM72A0PK05 275 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 NTN3O00634 580 aaPredicted RBP12.27□□□□□ -0.44
LIMS1-205ENST00000410093 SCO2O43819 266 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 PRKNO60260 465 aaPredicted RBP12.27□□□□□ -0.44
LIMS1-205ENST00000410093 SELENOFO60613 162 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 ITGA10O75578 1167 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 KLK3P07288 261 aaPredicted RBP12.27□□□□□ -0.44
LIMS1-205ENST00000410093 GP1BAP07359 652 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 INPP1P49441 399 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 DAP3P51398 398 aaKnown RBP12.27□□□□□ -0.44
LIMS1-205ENST00000410093 SCAND1P57086 179 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 RASGEF1BQ0VAM2 473 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 MESTQ5EB52 335 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 AGAP6Q5VW22 663 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 PYHIN1Q6K0P9 492 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 FDX2Q6P4F2 183 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 TMEM81Q6P7N7 255 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 ZNF517Q6ZMY9 492 aaPredicted RBP12.27□□□□□ -0.44
LIMS1-205ENST00000410093 NRARPQ7Z6K4 114 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 RDH10Q8IZV5 341 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 ZNF454Q8N9F8 522 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 SLC38A9Q8NBW4 561 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 ZNF519Q8TB69 540 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 MRGPRX4Q96LA9 322 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 AGAP4Q96P64 663 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 SPSB2Q99619 263 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 CTRCQ99895 268 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 RTN4RQ9BZR6 473 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 SLITRK2Q9H156 845 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 FANCFQ9NPI8 374 aa12.27□□□□□ -0.44
LIMS1-205ENST00000410093 CACNA1AO00555 2505 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 LOC102723996A0A087X1L8 192 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 TRBV11-1A0A0K0K1C0 115 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 PRSS37A4D1T9 235 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 TMEM212A6NML5 194 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 FAM47E-STBD1D6RA91 191 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 BOLA2-SMG1P6H3BVE0 249 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 MEN1O00255 615 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 PLPP3O14495 311 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 F13BP05160 661 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 ZNF883P0CG24 379 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 CCKBRP32239 447 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 THBS2P35442 1172 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 PITPNBP48739 271 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 CAV3P56539 151 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 OR2B6P58173 313 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 SNTA1Q13424 505 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 DUSP18Q8NEJ0 188 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 OR51L1Q8NGJ5 315 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 ENKURQ8TC29 256 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 C15orf40Q8WUR7 153 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 ADAMTS14Q8WXS8 1223 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 WDR77Q9BQA1 342 aaPredicted RBP12.27□□□□□ -0.45
LIMS1-205ENST00000410093 COMMD4Q9H0A8 199 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 SERINC1Q9NRX5 453 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 MYOTQ9UBF9 498 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 EXTL2Q9UBQ6 330 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 COPS3Q9UNS2 423 aa12.27□□□□□ -0.45
LIMS1-205ENST00000410093 RASD1Q9Y272 281 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms