RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 NTN1O95631 604 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 KRT8P05787 483 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 TACSTD2P09758 323 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 IMPDH2P12268 514 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 ZNF19P17023 458 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 CENPAP49450 140 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 EVX1P49640 407 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 SLC25A1P53007 311 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 FOXL2P58012 376 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 RPS18P62269 152 aaKnown RBP11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 CBX3Q13185 183 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 FAM69BQ5VUD6 431 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 SLC6A19Q695T7 634 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 GPR139Q6DWJ6 353 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 DESI1Q6ICB0 168 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 RPL22L1Q6P5R6 122 aaKnown RBP11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 C5orf46Q6UWT4 87 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 BAIAP2L2Q6UXY1 529 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 JAZF1Q86VZ6 243 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 TMEM99Q8N816 258 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 C17orf47Q8NEP4 570 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 ZNF563Q8TA94 476 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 KISS1RQ969F8 398 aaPredicted RBP11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 MARVELD3Q96A59 401 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 C3orf49Q96BT1 292 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 SDHCQ99643 169 aaPredicted RBP11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 ATF6BQ99941 703 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 MED20Q9H944 212 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 NRIP3Q9NQ35 241 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 COMMD3Q9UBI1 195 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 NXT1Q9UKK6 140 aaKnown RBP11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 SLC5A6Q9Y289 635 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 PTRH2Q9Y3E5 179 aaKnown RBP11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 CLDN16Q9Y5I7 305 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 NPFFR2Q9Y5X5 522 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 NUP210LQ5VU65 1888 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 TRAV1-2A0A0B4J238 106 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 ARGFXA6NJG6 315 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 HSPB2A8KAH6 182 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 FAM25AB3EWG3 89 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 FAM25CB3EWG5 89 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 FAM25GB3EWG6 89 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 PDCD5O14737 125 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 PHYHO14832 338 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 OGG1O15527 345 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 TRIM3O75382 744 aaPredicted RBP11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 LALBAP00709 142 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 CLEC2LP0C7M8 214 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 SLC2A2P11168 524 aaPredicted RBP11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 PGCP20142 388 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 GRNP28799 593 aaKnown RBP11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 FOLR3P41439 243 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 DIO1P49895 249 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 PNLIPRP2P54317 469 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 OR2B6P58173 313 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 DOC2BQ14184 412 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 HSPB2Q16082 182 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 ZNF362Q5T0B9 420 aaPredicted RBP11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 FNDC7Q5VTL7 733 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 AGAP6Q5VW22 663 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 LRRC28Q86X40 367 aaPredicted RBP11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 MISPQ8IVT2 679 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 SLC35F2Q8IXU6 374 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 C10orf53Q8N6V4 93 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 ZFP41Q8N8Y5 198 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 SYT14Q8NB59 555 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 PLPP5Q8NEB5 264 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 OR2Y1Q8NGV0 311 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 OR4C3Q8NH37 302 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 ABHD4Q8TB40 342 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 PTPMT1Q8WUK0 201 aaPredicted RBP11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 SNX33Q8WV41 574 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 THRSPQ92748 146 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 TP53INP1Q96A56 240 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 C4orf36Q96KX1 117 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 CMTM3Q96MX0 182 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 AGAP4Q96P64 663 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 SPSB2Q99619 263 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 MRI1Q9BV20 369 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 MIXL1Q9H2W2 232 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 NANSQ9NR45 359 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 MKL2Q9ULH7 1088 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 HIF3AQ9Y2N7 669 aa11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 YARS2Q9Y2Z4 477 aaKnown RBP11.68□□□□□ -0.54
SMARCB1-203ENST00000407082 F8P00451 2351 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 IGKV3D-11A0A0A0MRZ8 115 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 TCRBV16S1A1N1A0A5B0 115 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 OR2W5A6NFC9 320 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 CD8B2A6NJW9 211 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 IDSB3KWA1 339 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 ZNF879B4DU55 563 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 HRKO00198 91 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 CDC40O60508 579 aaKnown RBP eCLIP11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 GLCEO94923 617 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 TXNDC12O95881 172 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 RENP00797 406 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 CLPSP04118 112 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 HEXBP07686 556 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 CD14P08571 375 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms