RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 UBASH3BQ8TF42 649 aa18.26■□□□□ 0.51
RHBDD3-202ENST00000406335 TAMM41Q96BW9 452 aa18.26■□□□□ 0.51
RHBDD3-202ENST00000406335 MCHR1Q99705 422 aa18.26■□□□□ 0.51
RHBDD3-202ENST00000406335 ARMCX1Q9P291 453 aa18.26■□□□□ 0.51
RHBDD3-202ENST00000406335 RASD1Q9Y272 281 aa18.26■□□□□ 0.51
RHBDD3-202ENST00000406335 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.25■□□□□ 0.511e-7■■□□□ 12.6
RHBDD3-202ENST00000406335 A0A087WUJ7 227 aa18.25■□□□□ 0.51
RHBDD3-202ENST00000406335 M0R082 166 aa18.25■□□□□ 0.51
RHBDD3-202ENST00000406335 VAMP5O95183 116 aa18.25■□□□□ 0.51
RHBDD3-202ENST00000406335 CECR9P0C854 216 aa18.25■□□□□ 0.51
RHBDD3-202ENST00000406335 GIFP27352 417 aa18.25■□□□□ 0.51
RHBDD3-202ENST00000406335 GTF2E2P29084 291 aaKnown RBP18.25■□□□□ 0.51
RHBDD3-202ENST00000406335 SELENOPP49908 381 aa18.25■□□□□ 0.51
RHBDD3-202ENST00000406335 CRYBA2P53672 197 aa18.25■□□□□ 0.51
RHBDD3-202ENST00000406335 CDH12P55289 794 aa18.25■□□□□ 0.51
RHBDD3-202ENST00000406335 VMACQ2NL98 169 aa18.25■□□□□ 0.51
RHBDD3-202ENST00000406335 FAM69AQ5T7M9 428 aa18.25■□□□□ 0.51
RHBDD3-202ENST00000406335 PATL1Q86TB9 770 aaKnown RBP18.25■□□□□ 0.51
RHBDD3-202ENST00000406335 RANBP3LQ86VV4 465 aaPredicted RBP18.25■□□□□ 0.51
RHBDD3-202ENST00000406335 CALHM3Q86XJ0 350 aa18.25■□□□□ 0.51
RHBDD3-202ENST00000406335 RBM45Q8IUH3 476 aaKnown RBP18.25■□□□□ 0.51
RHBDD3-202ENST00000406335 SLC30A8Q8IWU4 369 aa18.25■□□□□ 0.51
RHBDD3-202ENST00000406335 C3orf56Q8N813 242 aa18.25■□□□□ 0.51
RHBDD3-202ENST00000406335 OR6T1Q8NGN1 323 aa18.25■□□□□ 0.51
RHBDD3-202ENST00000406335 ZNF417Q8TAU3 575 aa18.25■□□□□ 0.51
RHBDD3-202ENST00000406335 ALKBH3Q96Q83 286 aaPredicted RBP18.25■□□□□ 0.51
RHBDD3-202ENST00000406335 ZNF587Q96SQ5 575 aaPredicted RBP18.25■□□□□ 0.51
RHBDD3-202ENST00000406335 MOV10Q9HCE1 1003 aaKnown RBP18.25■□□□□ 0.51
RHBDD3-202ENST00000406335 MRGBPQ9NV56 204 aa18.25■□□□□ 0.51
RHBDD3-202ENST00000406335 CAPN7Q9Y6W3 813 aa18.25■□□□□ 0.51
RHBDD3-202ENST00000406335 TRAV36DV7A0A075B6V5 113 aa18.24■□□□□ 0.51
RHBDD3-202ENST00000406335 BBIP1A8MTZ0 92 aa18.24■□□□□ 0.51
RHBDD3-202ENST00000406335 LILRA1O75019 489 aa18.24■□□□□ 0.51
RHBDD3-202ENST00000406335 TACSTD2P09758 323 aa18.24■□□□□ 0.51
RHBDD3-202ENST00000406335 GRPRP30550 384 aa18.24■□□□□ 0.51
RHBDD3-202ENST00000406335 THBS4P35443 961 aa18.24■□□□□ 0.51
RHBDD3-202ENST00000406335 CDH15P55291 814 aa18.24■□□□□ 0.51
RHBDD3-202ENST00000406335 SCGB2A2Q13296 93 aa18.24■□□□□ 0.51
RHBDD3-202ENST00000406335 MAPRE2Q15555 327 aa18.24■□□□□ 0.51
RHBDD3-202ENST00000406335 COQ5Q5HYK3 327 aa18.24■□□□□ 0.51
RHBDD3-202ENST00000406335 SHQ1Q6PI26 577 aaKnown RBP18.24■□□□□ 0.51
RHBDD3-202ENST00000406335 C5orf46Q6UWT4 87 aa18.24■□□□□ 0.51
RHBDD3-202ENST00000406335 TSPYL5Q86VY4 417 aaPredicted RBP18.24■□□□□ 0.51
RHBDD3-202ENST00000406335 ZNF786Q8N393 782 aa18.24■□□□□ 0.51
RHBDD3-202ENST00000406335 POU5F2Q8N7G0 328 aa18.24■□□□□ 0.51
RHBDD3-202ENST00000406335 OR8J3Q8NGG0 315 aa18.24■□□□□ 0.51
RHBDD3-202ENST00000406335 VANGL1Q8TAA9 524 aaPredicted RBP18.24■□□□□ 0.51
RHBDD3-202ENST00000406335 ECSITQ9BQ95 431 aa18.24■□□□□ 0.51
RHBDD3-202ENST00000406335 EVA1AQ9H8M9 152 aa18.24■□□□□ 0.51
RHBDD3-202ENST00000406335 SELENONQ9NZV5 590 aa18.24■□□□□ 0.51
RHBDD3-202ENST00000406335 B3GAT1Q9P2W7 334 aa18.24■□□□□ 0.51
RHBDD3-202ENST00000406335 OR6C65A6NJZ3 312 aa18.23■□□□□ 0.51
RHBDD3-202ENST00000406335 CPSF4LA6NMK7 179 aaKnown RBP18.23■□□□□ 0.51
RHBDD3-202ENST00000406335 AIM2O14862 343 aa18.23■□□□□ 0.51
RHBDD3-202ENST00000406335 OR2T1O43869 369 aa18.23■□□□□ 0.51
RHBDD3-202ENST00000406335 BGLAPP02818 100 aa18.23■□□□□ 0.51
RHBDD3-202ENST00000406335 CALCRP30988 508 aa18.23■□□□□ 0.51
RHBDD3-202ENST00000406335 CAPZA2P47755 286 aa18.23■□□□□ 0.51
RHBDD3-202ENST00000406335 DVL1P1P54792 670 aaPredicted RBP18.23■□□□□ 0.51
RHBDD3-202ENST00000406335 CLDN17P56750 224 aa18.23■□□□□ 0.51
RHBDD3-202ENST00000406335 IL1RL1Q01638 556 aa18.23■□□□□ 0.51
RHBDD3-202ENST00000406335 TRIP10Q15642 601 aa18.23■□□□□ 0.51
RHBDD3-202ENST00000406335 ENTPD8Q5MY95 495 aa18.23■□□□□ 0.51
RHBDD3-202ENST00000406335 INTS11Q5TA45 600 aaKnown RBP18.23■□□□□ 0.51
RHBDD3-202ENST00000406335 CCDC80Q76M96 950 aa18.23■□□□□ 0.51
RHBDD3-202ENST00000406335 LINGO2Q7L985 606 aa18.23■□□□□ 0.51
RHBDD3-202ENST00000406335 GLCCI1Q86VQ1 547 aa18.23■□□□□ 0.51
RHBDD3-202ENST00000406335 NUP37Q8NFH4 326 aa18.23■□□□□ 0.51
RHBDD3-202ENST00000406335 SLC26A7Q8TE54 656 aa18.23■□□□□ 0.51
RHBDD3-202ENST00000406335 BCL2L2Q92843 193 aaPredicted RBP18.23■□□□□ 0.51
RHBDD3-202ENST00000406335 GCDHQ92947 438 aaPredicted RBP18.23■□□□□ 0.51
RHBDD3-202ENST00000406335 OXGR1Q96P68 337 aa18.23■□□□□ 0.51
RHBDD3-202ENST00000406335 YLPM1P49750 1951 aaKnown RBP18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 ARPC4-TTLL3A0A0A6YYG9 625 aa18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 A0A0A6YYJ9 748 aa18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 B4DSR2 109 aa18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 LRRN3E7EW58 273 aa18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 FMO6PO60774 539 aa18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 UPK3AO75631 287 aa18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 RGS9O75916 674 aaPredicted RBP18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 VENTXO95231 258 aa18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 NPPAP01160 153 aa18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 THY1P04216 161 aa18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 ADRA2AP08913 450 aa18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 ZNF43P17038 809 aa18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 NPRL3Q12980 569 aa18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 WDR88Q6ZMY6 472 aa18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 H1FNTQ75WM6 255 aaPredicted RBP18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 ZNF418Q8TF45 676 aaPredicted RBP18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 RCN3Q96D15 328 aa18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 BOD1Q96IK1 185 aa18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 ZNF583Q96ND8 569 aa18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 MOGAT1Q96PD6 335 aa18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 DOK1Q99704 481 aa18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 SH3GL1Q99961 368 aa18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 TPK1Q9H3S4 243 aa18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 ZNF442Q9H7R0 627 aa18.22■□□□□ 0.51
RHBDD3-202ENST00000406335 LYNX1G3V0Z9 82 aa18.21■□□□□ 0.51
RHBDD3-202ENST00000406335 MS4A18H0YCH9 400 aa18.21■□□□□ 0.51
RHBDD3-202ENST00000406335 LYPD3O95274 346 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms