RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 LRRC36Q1X8D7 754 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 OR2B11Q5JQS5 317 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 CGB2Q6NT52 195 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 ERICH5Q6P6B1 374 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 TTC23LQ6PF05 361 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 HSDL2Q6YN16 418 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 DNM1P46Q6ZS02 220 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 C19orf35Q6ZS72 473 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 NIPA1Q7RTP0 329 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 PPP1R27Q86WC6 154 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 NRMQ8IXM6 262 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 KATNAL2Q8IYT4 538 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 CCNYL1Q8N7R7 359 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 B3GNT7Q8NFL0 401 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 GPR151Q8TDV0 419 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 AGAP11Q8TF27 550 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 GTSF1Q8WW33 167 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 CHCHD10Q8WYQ3 142 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 SNF8Q96H20 258 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 P2RY13Q9BPV8 354 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 MRPL45Q9BRJ2 306 aaKnown RBP3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 C20orf24Q9BUV8 137 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 MFFQ9GZY8 342 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 LRRC19Q9H756 370 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 TREM1Q9NP99 234 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 C8orf4Q9NR00 106 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 UXTQ9UBK9 157 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 PITPNC1Q9UKF7 332 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 NUP50Q9UKX7 468 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 SLC22A14Q9Y267 594 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 RLFQ13129 1914 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 POGZQ7Z3K3 1410 aa3.7□□□□□ -1.82
HMGB1P13-201ENST00000406019 A0A087WWV3 80 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 TRAV25A0A0B4J276 109 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 IQCF5A8MTL0 148 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 K7ERQ8 282 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 K7N7A8 449 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 RAD51BO15315 384 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 CLOCKO15516 846 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 ATP8B1O43520 1251 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 ZNF354AO60765 605 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 NDUFS6O75380 124 aaKnown RBP3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 ATP5HO75947 161 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 CLPXO76031 633 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 LGI1O95970 557 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 OTCP00480 354 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 FGF1P05230 155 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 UBTFL1P0CB47 393 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 RALBP11234 206 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 IDO1P14902 403 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 ZP3P21754 424 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 AQP1P29972 269 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 NAMPTP43490 491 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 CLDN8P56748 225 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 MAP3K7CLP57077 242 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 SMARCB1Q12824 385 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 CASP8Q14790 479 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 MRPL23Q16540 153 aaKnown RBP3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 TIMM50Q3ZCQ8 353 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 OLFML2AQ68BL7 652 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 C11orf71Q6IPW1 123 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 WDR74Q6RFH5 385 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 AKAP14Q86UN6 197 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 MARCH9Q86YJ5 346 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 PIANPQ8IYJ0 282 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 SYCE1Q8N0S2 351 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 PQLC3Q8N755 202 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 FAM222BQ8WU58 562 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 ASZ1Q8WWH4 475 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 VSIG2Q96IQ7 327 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 PGLYRP4Q96LB8 373 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 PPP1R36Q96LQ0 422 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 PARD6GQ9BYG4 376 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 SHCBP1LQ9BZQ2 653 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 NEUROG2Q9H2A3 272 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 FOLH1BQ9HBA9 442 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 MRPL40Q9NQ50 206 aaKnown RBP3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 CD300AQ9UGN4 299 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 MYO15BQ96JP2 1530 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 MAPK8IP3Q9UPT6 1336 aa3.69□□□□□ -1.82
HMGB1P13-201ENST00000406019 IGLV8-61A0A075B6I0 122 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 IGHV1OR21-1A0A087WYE8 117 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 IGHV7-81A0A0B4J1V7 117 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 A0A1B0GUA9 196 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 SPECC1L-ADORA2AF8WAN1 911 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 AKR7A2O43488 359 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 TOM1O60784 492 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 OR2J3O76001 311 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 TSPAN13O95857 204 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 RBMY1CP0DJD4 496 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 PRPS2P11908 318 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 CCNB1P14635 433 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 CTRB1P17538 263 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 PRKACAP17612 351 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 GATA2P23769 480 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 IL32P24001 234 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 FASP25445 335 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 IFNA8P32881 189 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 NUP62P37198 522 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 MAGEA1P43355 309 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms