RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 OR8S1Q8NH09 359 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 ASB17Q8WXJ9 295 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 APH1AQ96BI3 265 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 OR10A2Q9H208 303 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 PCDHB16Q9NRJ7 776 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 SLC22A11Q9NSA0 550 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 MYEF2Q9P2K5 600 aaKnown RBP8.26□□□□□ -1.09
LIG4-202ENST00000405925 ACOD1A6NK06 481 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 ZNF587BE7ETH6 402 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 TAF4O00268 1085 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 SEC14L2O76054 403 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 PTPN6P29350 595 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 SLC35A2P78381 396 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 ZNF141Q15928 474 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 TMEM69Q5SWH9 247 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 TIGD3Q6B0B8 471 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 TMEM53Q6P2H8 277 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 NPSR1Q6W5P4 371 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 FAM57BQ71RH2 274 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 KCTD20Q7Z5Y7 419 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 MRGPREQ86SM8 312 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 BBS1Q8NFJ9 593 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 SARAFQ96BY9 339 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 SLC25A44Q96H78 314 aaPredicted RBP8.26□□□□□ -1.09
LIG4-202ENST00000405925 COMMD9Q9P000 198 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 PCDHGA3Q9Y5H0 932 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 MEGF11A6BM72 1044 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 ARRDC5A6NEK1 342 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 ZFP36L2P47974 494 aaKnown RBP8.26□□□□□ -1.09
LIG4-202ENST00000405925 DSCR4P56555 118 aaPredicted RBP8.26□□□□□ -1.09
LIG4-202ENST00000405925 TGIF1Q15583 401 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 OCLNQ16625 522 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 PRSS53Q2L4Q9 553 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 C9orf40Q8IXQ3 194 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 SLC15A4Q8N697 577 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 ELP5Q8TE02 316 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 C15orf40Q8WUR7 153 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 FAM173AQ9BQD7 235 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 URM1Q9BTM9 101 aaKnown RBP8.26□□□□□ -1.09
LIG4-202ENST00000405925 WDR54Q9H977 334 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 TMEFF2Q9UIK5 374 aaPredicted RBP8.26□□□□□ -1.09
LIG4-202ENST00000405925 HDGFL3Q9Y3E1 203 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 LOC100509620A0A075B734 347 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 A0A087WZY1 265 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 TNFSF11O14788 317 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 CBFA2T3O75081 653 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 TIAF1O95411 115 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 FGF5P12034 268 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 SPI1P17947 270 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 SDHBP21912 280 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 CAPZA1P52907 286 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 SCGB2B2Q4G0G5 96 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 TMPRSS7Q7RTY8 843 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 BOLLQ8N9W6 283 aaKnown RBP8.25□□□□□ -1.09
LIG4-202ENST00000405925 GHSRQ92847 366 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 ZBTB8AQ96BR9 441 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 ZNF845Q96IR2 970 aaPredicted RBP8.25□□□□□ -1.09
LIG4-202ENST00000405925 ZFP64Q9NPA5 681 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 PLEKHA6Q9Y2H5 1048 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 PCDHGB6Q9Y5F9 930 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 HYAL3O43820 417 aaPredicted RBP8.25□□□□□ -1.09
LIG4-202ENST00000405925 GDF9O60383 454 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 NOS1APO75052 506 aaPredicted RBP8.25□□□□□ -1.09
LIG4-202ENST00000405925 RBMXL2O75526 392 aaKnown RBP8.25□□□□□ -1.09
LIG4-202ENST00000405925 QDPRP09417 244 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 ANKRD34CP0C6C1 535 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 SMIM10L1P0DMW3 83 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 SLC2A1P11166 492 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 PGAM2P15259 253 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 NPR2P20594 1047 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 C4BPBP20851 252 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 MYBPHQ13203 477 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 RAB11BQ15907 218 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 ZNF74Q16587 644 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 DESI1Q6ICB0 168 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 RPL22L1Q6P5R6 122 aaKnown RBP8.25□□□□□ -1.09
LIG4-202ENST00000405925 FIP1L1Q6UN15 594 aaKnown RBP8.25□□□□□ -1.09
LIG4-202ENST00000405925 ARSKQ6UWY0 536 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 DCXRQ7Z4W1 244 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 STK35Q8TDR2 534 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 ROBO4Q8WZ75 1007 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 MUL1Q969V5 352 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 MUCL1Q96DR8 90 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 SMIM10Q96HG1 83 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 HCAR1Q9BXC0 346 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 MMP25Q9NPA2 562 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 CENPVL1A0A0U1RR11 272 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 A0A1W2PQL4 384 aaPredicted RBP8.25□□□□□ -1.09
LIG4-202ENST00000405925 A6NHS1 94 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 HPP00738 406 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 ZNF766Q5HY98 468 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 SPINK14Q6IE38 97 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.25□□□□□ -1.09
LIG4-202ENST00000405925 DND1Q8IYX4 353 aaKnown RBP8.25□□□□□ -1.09
LIG4-202ENST00000405925 OR4D11Q8NGI4 311 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 TRMT10AQ8TBZ6 339 aaKnown RBP8.25□□□□□ -1.09
LIG4-202ENST00000405925 SGCDQ92629 289 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 EMC7Q9NPA0 242 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 C14orf119Q9NWQ9 140 aa8.25□□□□□ -1.09
LIG4-202ENST00000405925 FRMPD3Q5JV73 1810 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms