RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 LCKP06239 509 aa18.84■□□□□ 0.61
TPM1-208ENST00000404484 RAP1BP61224 184 aa18.84■□□□□ 0.61
TPM1-208ENST00000404484 RAP1AP62834 184 aa18.84■□□□□ 0.61
TPM1-208ENST00000404484 CSNK2A1P68400 391 aaPredicted RBP18.84■□□□□ 0.61
TPM1-208ENST00000404484 PON3Q15166 354 aa18.84■□□□□ 0.61
TPM1-208ENST00000404484 ACKR1Q16570 336 aa18.84■□□□□ 0.61
TPM1-208ENST00000404484 ZNF239Q16600 458 aaKnown RBP18.84■□□□□ 0.61
TPM1-208ENST00000404484 PXKQ7Z7A4 578 aa18.84■□□□□ 0.61
TPM1-208ENST00000404484 SULF2Q8IWU5 870 aa18.84■□□□□ 0.61
TPM1-208ENST00000404484 TMEM178AQ8NBL3 297 aa18.84■□□□□ 0.61
TPM1-208ENST00000404484 FAM83FQ8NEG4 500 aaPredicted RBP18.84■□□□□ 0.61
TPM1-208ENST00000404484 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.84■□□□□ 0.61
TPM1-208ENST00000404484 INPP5EQ9NRR6 644 aa18.84■□□□□ 0.61
TPM1-208ENST00000404484 TMEM129A0AVI4 362 aa18.83■□□□□ 0.6
TPM1-208ENST00000404484 PINLYPA6NC86 204 aa18.83■□□□□ 0.6
TPM1-208ENST00000404484 OR6C68A6NDL8 312 aa18.83■□□□□ 0.6
TPM1-208ENST00000404484 NPIPA5E9PKD4 350 aa18.83■□□□□ 0.6
TPM1-208ENST00000404484 DNPH1O43598 174 aa18.83■□□□□ 0.6
TPM1-208ENST00000404484 EIF1BO60739 113 aaKnown RBP18.83■□□□□ 0.6
TPM1-208ENST00000404484 TRAPPC6AO75865 159 aa18.83■□□□□ 0.6
TPM1-208ENST00000404484 IGHA1P01876 353 aa18.83■□□□□ 0.6
TPM1-208ENST00000404484 B3GALT5-AS1P59052 145 aa18.83■□□□□ 0.6
TPM1-208ENST00000404484 TIGD6Q17RP2 521 aa18.83■□□□□ 0.6
TPM1-208ENST00000404484 MESTQ5EB52 335 aa18.83■□□□□ 0.6
TPM1-208ENST00000404484 GPR107Q5VW38 600 aa18.83■□□□□ 0.6
TPM1-208ENST00000404484 B3GNT6Q6ZMB0 384 aa18.83■□□□□ 0.6
TPM1-208ENST00000404484 YRDCQ86U90 279 aaKnown RBP18.83■□□□□ 0.6
TPM1-208ENST00000404484 NANOGP1Q8N7R0 232 aa18.83■□□□□ 0.6
TPM1-208ENST00000404484 POMGNT2Q8NAT1 580 aa18.83■□□□□ 0.6
TPM1-208ENST00000404484 OR51G2Q8NGK0 314 aa18.83■□□□□ 0.6
TPM1-208ENST00000404484 OR9Q1Q8NGQ5 310 aa18.83■□□□□ 0.6
TPM1-208ENST00000404484 OR2T4Q8NH00 348 aa18.83■□□□□ 0.6
TPM1-208ENST00000404484 KISS1RQ969F8 398 aaPredicted RBP18.83■□□□□ 0.6
TPM1-208ENST00000404484 KLHL15Q96M94 604 aa18.83■□□□□ 0.6
TPM1-208ENST00000404484 COG8Q96MW5 612 aa18.83■□□□□ 0.6
TPM1-208ENST00000404484 SFXN2Q96NB2 322 aa18.83■□□□□ 0.6
TPM1-208ENST00000404484 ZNF703Q9H7S9 590 aaPredicted RBP18.83■□□□□ 0.6
TPM1-208ENST00000404484 NPIPA1Q9UND3 350 aa18.83■□□□□ 0.6
TPM1-208ENST00000404484 MOKQ9UQ07 419 aa18.83■□□□□ 0.6
TPM1-208ENST00000404484 A0A1W2PNR3 127 aa18.82■□□□□ 0.6
TPM1-208ENST00000404484 MS4A18H0YCH9 400 aa18.82■□□□□ 0.6
TPM1-208ENST00000404484 AKR7A3O95154 331 aa18.82■□□□□ 0.6
TPM1-208ENST00000404484 SPI1P17947 270 aa18.82■□□□□ 0.6
TPM1-208ENST00000404484 GSTT1P30711 240 aa18.82■□□□□ 0.6
TPM1-208ENST00000404484 ACVR1BP36896 505 aa18.82■□□□□ 0.6
TPM1-208ENST00000404484 CDKN2AP42771 156 aaKnown RBP18.82■□□□□ 0.6
TPM1-208ENST00000404484 DIO1P49895 249 aa18.82■□□□□ 0.6
TPM1-208ENST00000404484 TMBIM6P55061 237 aa18.82■□□□□ 0.6
TPM1-208ENST00000404484 ACTC1P68032 377 aa18.82■□□□□ 0.6
TPM1-208ENST00000404484 ACTA1P68133 377 aa18.82■□□□□ 0.6
TPM1-208ENST00000404484 GGTLC2Q14390 218 aa18.82■□□□□ 0.6
TPM1-208ENST00000404484 MED22Q15528 200 aa18.82■□□□□ 0.6
TPM1-208ENST00000404484 MS4A18Q3C1V0 323 aa18.82■□□□□ 0.6
TPM1-208ENST00000404484 PAQR6Q6TCH4 344 aa18.82■□□□□ 0.6
TPM1-208ENST00000404484 HDDC2Q7Z4H3 204 aa18.82■□□□□ 0.6
TPM1-208ENST00000404484 OR4F15Q8NGB8 312 aa18.82■□□□□ 0.6
TPM1-208ENST00000404484 ZNF519Q8TB69 540 aa18.82■□□□□ 0.6
TPM1-208ENST00000404484 RELTQ969Z4 430 aa18.82■□□□□ 0.6
TPM1-208ENST00000404484 SCMH1Q96GD3 660 aa18.82■□□□□ 0.6
TPM1-208ENST00000404484 SMAD5Q99717 465 aaKnown RBP18.82■□□□□ 0.6
TPM1-208ENST00000404484 TAS2R16Q9NYV7 291 aa18.82■□□□□ 0.6
TPM1-208ENST00000404484 PCDHGB7Q9Y5F8 929 aa18.82■□□□□ 0.6
TPM1-208ENST00000404484 NOX1Q9Y5S8 564 aa18.82■□□□□ 0.6
TPM1-208ENST00000404484 ARHGEF9O43307 516 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 APOL3O95236 402 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 HPNP05981 417 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 ADRA2AP08913 450 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 RFPL3SP0C7P2 107 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 SHC1P29353 583 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 PLGLB1Q02325 96 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 SPHARQ15513 63 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 IGFL2Q6UWQ7 119 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 ACBD7Q8N6N7 88 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 RAB2BQ8WUD1 216 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 ISOC1Q96CN7 298 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 ZHX1-C8orf76Q96EF9 292 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 BCL7BQ9BQE9 202 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 NAA11Q9BSU3 229 aaPredicted RBP18.81■□□□□ 0.6
TPM1-208ENST00000404484 QPCTLQ9NXS2 382 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 NBASA2RRP1 2371 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 LOC102725191A0A1B0GVB3 256 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 J3QRE1 110 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 GLCEO94923 617 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 BCL10O95999 233 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 PLGP00747 810 aaPredicted RBP18.81■□□□□ 0.6
TPM1-208ENST00000404484 OPN1LWP04000 364 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 GYPBP06028 91 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 SBK2P0C263 348 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 CLUP10909 449 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 MEOX1P50221 254 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 HSF1Q00613 529 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 HYAL4Q2M3T9 481 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 ZNF766Q5HY98 468 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 GALNTL5Q7Z4T8 443 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 UEVLDQ8IX04 471 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 SMPDL3BQ92485 455 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 CNN2Q99439 309 aaKnown RBP18.81■□□□□ 0.6
TPM1-208ENST00000404484 HES7Q9BYE0 225 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 TTTY12Q9BZ98 90 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 RPRD1BQ9NQG5 326 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms