RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 RNF6Q9Y252 685 aa29.51■■■□□ 2.31
CSNK1E-204ENST00000403904 NPIPB13A6NJU9 1138 aa29.5■■■□□ 2.31
CSNK1E-204ENST00000403904 NPIPB4C9JG80 1138 aa29.5■■■□□ 2.31
CSNK1E-204ENST00000403904 RAD23AP54725 363 aa29.5■■■□□ 2.31
CSNK1E-204ENST00000403904 ARMC4Q5T2S8 1044 aa29.5■■■□□ 2.31
CSNK1E-204ENST00000403904 BTLAQ7Z6A9 289 aa29.5■■■□□ 2.31
CSNK1E-204ENST00000403904 OR2T33Q8NG76 320 aa29.5■■■□□ 2.31
CSNK1E-204ENST00000403904 OR6K3Q8NGY3 331 aa29.5■■■□□ 2.31
CSNK1E-204ENST00000403904 OR4Q3Q8NH05 313 aa29.5■■■□□ 2.31
CSNK1E-204ENST00000403904 STARD4Q96DR4 205 aa29.5■■■□□ 2.31
CSNK1E-204ENST00000403904 PARPBPQ9NWS1 579 aa29.5■■■□□ 2.31
CSNK1E-204ENST00000403904 ZNF432O94892 652 aa29.49■■■□□ 2.31
CSNK1E-204ENST00000403904 PTDSS1P48651 473 aaKnown RBP29.49■■■□□ 2.31
CSNK1E-204ENST00000403904 RPS6KA3P51812 740 aa29.49■■■□□ 2.31
CSNK1E-204ENST00000403904 NPRL3Q12980 569 aa29.49■■■□□ 2.31
CSNK1E-204ENST00000403904 CAMK2DQ13557 499 aa29.49■■■□□ 2.31
CSNK1E-204ENST00000403904 GINS1Q14691 196 aa29.49■■■□□ 2.31
CSNK1E-204ENST00000403904 PTGES3Q15185 160 aaKnown RBP29.49■■■□□ 2.31
CSNK1E-204ENST00000403904 TMEM236Q5W0B7 351 aa29.49■■■□□ 2.31
CSNK1E-204ENST00000403904 PACRGLQ8N7B6 248 aa29.49■■■□□ 2.31
CSNK1E-204ENST00000403904 RASD2Q96D21 266 aa29.49■■■□□ 2.31
CSNK1E-204ENST00000403904 ZNF570Q96NI8 536 aa29.49■■■□□ 2.31
CSNK1E-204ENST00000403904 OR2M2Q96R28 347 aa29.49■■■□□ 2.31
CSNK1E-204ENST00000403904 GABARAPL3Q9BY60 117 aa29.49■■■□□ 2.31
CSNK1E-204ENST00000403904 C8orf4Q9NR00 106 aa29.49■■■□□ 2.31
CSNK1E-204ENST00000403904 ENOPH1Q9UHY7 261 aa29.49■■■□□ 2.31
CSNK1E-204ENST00000403904 RCE1Q9Y256 329 aa29.49■■■□□ 2.31
CSNK1E-204ENST00000403904 ZNF726A6NNF4 738 aa29.48■■■□□ 2.31
CSNK1E-204ENST00000403904 SNAP29O95721 258 aa29.48■■■□□ 2.31
CSNK1E-204ENST00000403904 BMP5P22003 454 aa29.48■■■□□ 2.31
CSNK1E-204ENST00000403904 ACVR1BP36896 505 aa29.48■■■□□ 2.31
CSNK1E-204ENST00000403904 GIPRP48546 466 aa29.48■■■□□ 2.31
CSNK1E-204ENST00000403904 RUNX1T1Q06455 604 aa29.48■■■□□ 2.31
CSNK1E-204ENST00000403904 CARD17Q5XLA6 110 aa29.48■■■□□ 2.31
CSNK1E-204ENST00000403904 OR6X1Q8NH79 312 aa29.48■■■□□ 2.31
CSNK1E-204ENST00000403904 ZNF629Q9UEG4 869 aaPredicted RBP29.48■■■□□ 2.31
CSNK1E-204ENST00000403904 SLC5A6Q9Y289 635 aa29.48■■■□□ 2.31
CSNK1E-204ENST00000403904 MYO18BQ8IUG5 2567 aa29.48■■■□□ 2.31
CSNK1E-204ENST00000403904 NCOA6Q14686 2063 aaPredicted RBP29.48■■■□□ 2.31
CSNK1E-204ENST00000403904 TEX13CA0A0J9YWL9 993 aa29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 AKAP8O43823 692 aaKnown RBP29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 PLA2G2AP14555 144 aa29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 CDH2P19022 906 aaPredicted RBP29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 NOS3P29474 1203 aa29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 SDHAP31040 664 aa29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 OPRM1P35372 400 aa29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 SLC35F1Q5T1Q4 408 aa29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 SLC27A4Q6P1M0 643 aa29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 LIX1LQ8IVB5 337 aa29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 ZNF100Q8IYN0 542 aa29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 LNX2Q8N448 690 aa29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 ARIH2OSQ8N7S6 290 aa29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 ZNF519Q8TB69 540 aa29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 ADAD1Q96M93 576 aaKnown RBP29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 TOR3AQ9H497 397 aa29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 ERRFI1Q9UJM3 462 aaPredicted RBP29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 ARPC3O15145 178 aa29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 APEHP13798 732 aaKnown RBP29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 CDK5Q00535 292 aa29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 GPR139Q6DWJ6 353 aa29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 ACSM5Q6NUN0 579 aa29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 MTFR2Q6P444 385 aa29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 APH1AQ96BI3 265 aa29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 SLC25A44Q96H78 314 aaPredicted RBP29.47■■■□□ 2.31
CSNK1E-204ENST00000403904 DLGAP1O14490 977 aa29.46■■■□□ 2.31
CSNK1E-204ENST00000403904 SMNDC1O75940 238 aaKnown RBP eCLIP29.46■■■□□ 2.31
CSNK1E-204ENST00000403904 IL18BPO95998 194 aa29.46■■■□□ 2.31
CSNK1E-204ENST00000403904 IGHV3-9P01782 118 aa29.46■■■□□ 2.31
CSNK1E-204ENST00000403904 MYBPC1Q00872 1141 aa29.46■■■□□ 2.31
CSNK1E-204ENST00000403904 PGGHGQ32M88 737 aa29.46■■■□□ 2.31
CSNK1E-204ENST00000403904 MESTQ5EB52 335 aa29.46■■■□□ 2.31
CSNK1E-204ENST00000403904 TMEM123Q8N131 208 aa29.46■■■□□ 2.31
CSNK1E-204ENST00000403904 MBOAT4Q96T53 435 aa29.46■■■□□ 2.31
CSNK1E-204ENST00000403904 PLSCR4Q9NRQ2 329 aa29.46■■■□□ 2.31
CSNK1E-204ENST00000403904 SMPD3Q9NY59 655 aaPredicted RBP29.46■■■□□ 2.31
CSNK1E-204ENST00000403904 COQ3Q9NZJ6 369 aa29.46■■■□□ 2.31
CSNK1E-204ENST00000403904 PROCRQ9UNN8 238 aa29.46■■■□□ 2.31
CSNK1E-204ENST00000403904 UBR5O95071 2799 aaPredicted RBP29.45■■■□□ 2.31
CSNK1E-204ENST00000403904 ARHGEF9O43307 516 aa29.45■■■□□ 2.31
CSNK1E-204ENST00000403904 TXNDC12O95881 172 aa29.45■■■□□ 2.31
CSNK1E-204ENST00000403904 CGAP01215 116 aa29.45■■■□□ 2.31
CSNK1E-204ENST00000403904 ACADSP16219 412 aa29.45■■■□□ 2.31
CSNK1E-204ENST00000403904 OR3A2P47893 321 aa29.45■■■□□ 2.31
CSNK1E-204ENST00000403904 LGALS3BPQ08380 585 aa29.45■■■□□ 2.31
CSNK1E-204ENST00000403904 ZNF566Q969W8 418 aa29.45■■■□□ 2.31
CSNK1E-204ENST00000403904 VCXQ9H320 206 aa29.45■■■□□ 2.31
CSNK1E-204ENST00000403904 BAIAP2Q9UQB8 552 aa29.45■■■□□ 2.31
CSNK1E-204ENST00000403904 FLNCQ14315 2725 aa29.45■■■□□ 2.3
CSNK1E-204ENST00000403904 IDH3BO43837 385 aa29.44■■■□□ 2.3
CSNK1E-204ENST00000403904 SLC43A1O75387 559 aa29.44■■■□□ 2.3
CSNK1E-204ENST00000403904 TRMUO75648 421 aaKnown RBP29.44■■■□□ 2.3
CSNK1E-204ENST00000403904 HIST1H1CP16403 213 aaKnown RBP29.44■■■□□ 2.3
CSNK1E-204ENST00000403904 SMSP52788 366 aa29.44■■■□□ 2.3
CSNK1E-204ENST00000403904 KRR1Q13601 381 aaKnown RBP29.44■■■□□ 2.3
CSNK1E-204ENST00000403904 TFAP2EQ6VUC0 442 aa29.44■■■□□ 2.3
CSNK1E-204ENST00000403904 SYT14Q8NB59 555 aa29.44■■■□□ 2.3
CSNK1E-204ENST00000403904 HDAC2Q92769 488 aaKnown RBP29.44■■■□□ 2.3
CSNK1E-204ENST00000403904 OPN3Q9H1Y3 402 aaPredicted RBP29.44■■■□□ 2.3
CSNK1E-204ENST00000403904 SLC25A19Q9HC21 320 aa29.44■■■□□ 2.3
CSNK1E-204ENST00000403904 PRSS50Q9UI38 385 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms