RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 TACSTD2P09758 323 aa18.05■□□□□ 0.48
CCDC47-202ENST00000403162 RAB38P57729 211 aa18.05■□□□□ 0.48
CCDC47-202ENST00000403162 PRPS1P60891 318 aa18.05■□□□□ 0.48
CCDC47-202ENST00000403162 FAAP20Q6NZ36 180 aa18.05■□□□□ 0.48
CCDC47-202ENST00000403162 RNF44Q7L0R7 432 aa18.05■□□□□ 0.48
CCDC47-202ENST00000403162 BAHD1Q8TBE0 780 aaPredicted RBP18.05■□□□□ 0.48
CCDC47-202ENST00000403162 ALG12Q9BV10 488 aa18.05■□□□□ 0.48
CCDC47-202ENST00000403162 SDHAF2Q9NX18 166 aa18.05■□□□□ 0.48
CCDC47-202ENST00000403162 HS3ST3A1Q9Y663 406 aa18.05■□□□□ 0.48
CCDC47-202ENST00000403162 KCNMB2Q9Y691 235 aa18.05■□□□□ 0.48
CCDC47-202ENST00000403162 A0A1W2PPC4 97 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 PSMD9O00233 223 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 OR10H2O60403 315 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 B3GALNT1O75752 331 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 HOXD4P09016 255 aaPredicted RBP18.04■□□□□ 0.48
CCDC47-202ENST00000403162 FNTBP49356 437 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 ERVK-25P63136 954 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 NFATC4Q14934 902 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 OR5M10Q6IEU7 315 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 LRRN1Q6UXK5 716 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 SLC16A9Q7RTY1 509 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 RD3Q7Z3Z2 195 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 DNAAF1Q8NEP3 725 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 COQ3Q9NZJ6 369 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 MUC3AQ02505 3323 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 TRBV5-5A0A0J9YX44 114 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 A0A1B0GVT2 93 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 METTL12A8MUP2 240 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 GLSO94925 669 aaPredicted RBP18.04■□□□□ 0.48
CCDC47-202ENST00000403162 PTHLHP12272 177 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 ADRA2CP18825 462 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 BCKDHBP21953 392 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 GRPRP30550 384 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 PTGS2P35354 604 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 SCAND1P57086 179 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 ALKBH1Q13686 389 aaKnown RBP18.04■□□□□ 0.48
CCDC47-202ENST00000403162 GPR18Q14330 331 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 RGS7BPQ6MZT1 257 aaPredicted RBP18.04■□□□□ 0.48
CCDC47-202ENST00000403162 Q6ZSR6 202 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 FAM220AQ7Z4H9 259 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 LRRTM1Q86UE6 522 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 CADM4Q8NFZ8 388 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 VSTM2LQ96N03 204 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 SLC19A3Q9BZV2 496 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 PCED1AQ9H1Q7 454 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 PRMT8Q9NR22 394 aaPredicted RBP18.04■□□□□ 0.48
CCDC47-202ENST00000403162 PRELID1Q9Y255 219 aa18.04■□□□□ 0.48
CCDC47-202ENST00000403162 HMSDA8MTL9 139 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 SUSD5O60279 629 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 UPK3AO75631 287 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 HIST1H2ABP04908 130 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 HOXA6P31267 233 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 LSSP48449 732 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 SLC25A1P53007 311 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 PSMD4P55036 377 aaKnown RBP18.03■□□□□ 0.48
CCDC47-202ENST00000403162 GXYLT1Q4G148 440 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 B3GNTL1Q67FW5 361 aaPredicted RBP18.03■□□□□ 0.48
CCDC47-202ENST00000403162 LEG1Q6P5S2 330 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 HIST3H2AQ7L7L0 130 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 TMEM105Q8N8V8 129 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 OR5AK2Q8NH90 309 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 HIST1H2ACQ93077 130 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 WDR92Q96MX6 357 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 NCOR1O75376 2440 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 FOXS1O43638 330 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 RGS11O94810 467 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 PVRP15151 417 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 CALCRP30988 508 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 FAUP35544 74 aaKnown RBP18.03■□□□□ 0.48
CCDC47-202ENST00000403162 DLX5P56178 289 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 SEC61A1P61619 476 aaKnown RBP18.03■□□□□ 0.48
CCDC47-202ENST00000403162 SLC36A1Q7Z2H8 476 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 C1orf210Q8IVY1 113 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 CSNK1A1LQ8N752 337 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 LHFPL5Q8TAF8 219 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 TSACCQ96A04 125 aaPredicted RBP18.03■□□□□ 0.48
CCDC47-202ENST00000403162 PNPLA2Q96AD5 504 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 MOKQ9UQ07 419 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 NUP210LQ5VU65 1888 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 CACNA1IQ9P0X4 2223 aa18.03■□□□□ 0.48
CCDC47-202ENST00000403162 A0A087WV48 116 aa18.02■□□□□ 0.48
CCDC47-202ENST00000403162 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.02■□□□□ 0.48
CCDC47-202ENST00000403162 NMBP08949 121 aa18.02■□□□□ 0.48
CCDC47-202ENST00000403162 OR8G3PP0DMU2 310 aa18.02■□□□□ 0.48
CCDC47-202ENST00000403162 S100A11P31949 105 aa18.02■□□□□ 0.48
CCDC47-202ENST00000403162 CDKN2AP42771 156 aaKnown RBP18.02■□□□□ 0.48
CCDC47-202ENST00000403162 MAP2K6P52564 334 aa18.02■□□□□ 0.48
CCDC47-202ENST00000403162 YPEL5P62699 121 aa18.02■□□□□ 0.48
CCDC47-202ENST00000403162 HLXQ14774 488 aaPredicted RBP18.02■□□□□ 0.48
CCDC47-202ENST00000403162 RBMS2Q15434 407 aaKnown RBP18.02■□□□□ 0.48
CCDC47-202ENST00000403162 CSRP2Q16527 193 aa18.02■□□□□ 0.48
CCDC47-202ENST00000403162 GLB1L2Q8IW92 636 aa18.02■□□□□ 0.48
CCDC47-202ENST00000403162 EXD3Q8N9H8 876 aa18.02■□□□□ 0.48
CCDC47-202ENST00000403162 OR13H1Q8NG92 308 aa18.02■□□□□ 0.48
CCDC47-202ENST00000403162 KLHL15Q96M94 604 aa18.02■□□□□ 0.48
CCDC47-202ENST00000403162 MRM2Q9UI43 246 aaKnown RBP18.02■□□□□ 0.48
CCDC47-202ENST00000403162 SLCO1B1Q9Y6L6 691 aa18.02■□□□□ 0.48
CCDC47-202ENST00000403162 SESN1Q9Y6P5 492 aa18.02■□□□□ 0.48
CCDC47-202ENST00000403162 C2orf74A8MZ97 194 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 H7C417 338 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms