RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 SLC25A44Q96H78 314 aaPredicted RBP16.82■□□□□ 0.28
RTN4-207ENST00000402434 FUZQ9BT04 418 aa16.82■□□□□ 0.28
RTN4-207ENST00000402434 OBP2BQ9NPH6 170 aa16.82■□□□□ 0.28
RTN4-207ENST00000402434 A0A1W2PR80 420 aa16.81■□□□□ 0.28
RTN4-207ENST00000402434 A0A1W2PRG6 482 aa16.81■□□□□ 0.28
RTN4-207ENST00000402434 TCRBV5S2A0A599 114 aa16.81■□□□□ 0.28
RTN4-207ENST00000402434 M0R3G1 203 aa16.81■□□□□ 0.28
RTN4-207ENST00000402434 BCL10O95999 233 aa16.81■□□□□ 0.28
RTN4-207ENST00000402434 PLAUP00749 431 aa16.81■□□□□ 0.28
RTN4-207ENST00000402434 F13BP05160 661 aa16.81■□□□□ 0.28
RTN4-207ENST00000402434 HOXB1P14653 301 aaPredicted RBP16.81■□□□□ 0.28
RTN4-207ENST00000402434 PRPS1P60891 318 aa16.81■□□□□ 0.28
RTN4-207ENST00000402434 ARF1P84077 181 aaKnown RBP16.81■□□□□ 0.28
RTN4-207ENST00000402434 BSPH1Q075Z2 132 aa16.81■□□□□ 0.28
RTN4-207ENST00000402434 TBRG1Q3YBR2 411 aa16.81■□□□□ 0.28
RTN4-207ENST00000402434 HIKESHIQ53FT3 197 aa16.81■□□□□ 0.28
RTN4-207ENST00000402434 ADAM5Q6NVV9 412 aa16.81■□□□□ 0.28
RTN4-207ENST00000402434 RRM2BQ7LG56 351 aa16.81■□□□□ 0.28
RTN4-207ENST00000402434 PIWIL3Q7Z3Z3 882 aaKnown RBP16.81■□□□□ 0.28
RTN4-207ENST00000402434 DHFR2Q86XF0 187 aa16.81■□□□□ 0.28
RTN4-207ENST00000402434 CDK20Q8IZL9 346 aa16.81■□□□□ 0.28
RTN4-207ENST00000402434 MOSPD2Q8NHP6 518 aa16.81■□□□□ 0.28
RTN4-207ENST00000402434 MCUR1Q96AQ8 359 aa16.81■□□□□ 0.28
RTN4-207ENST00000402434 CLPTM1LQ96KA5 538 aa16.81■□□□□ 0.28
RTN4-207ENST00000402434 THTPAQ9BU02 230 aa16.81■□□□□ 0.28
RTN4-207ENST00000402434 NELFAQ9H3P2 528 aa16.81■□□□□ 0.28
RTN4-207ENST00000402434 INIPQ9NRY2 104 aa16.81■□□□□ 0.28
RTN4-207ENST00000402434 RNF115Q9Y4L5 304 aa16.81■□□□□ 0.28
RTN4-207ENST00000402434 TRBV4-1A0A0J9YWV2 114 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 ZNF99A8MXY4 864 aaPredicted RBP16.8■□□□□ 0.28
RTN4-207ENST00000402434 CDC42EP2O14613 210 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 GYG2O15488 501 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 CLOCKO15516 846 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 RAF1P04049 648 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 FABP3P05413 133 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 CD3EP07766 207 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 SAGP10523 405 aaPredicted RBP16.8■□□□□ 0.28
RTN4-207ENST00000402434 PAX7P23759 505 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 HOXC12P31275 282 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 SLC9A3P48764 834 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 IST1P53990 364 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 SMIM11AP58511 58 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 ZNF627Q7L945 461 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 OAFQ86UD1 273 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 OR6N1Q8NGY5 312 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 POP5Q969H6 163 aaKnown RBP16.8■□□□□ 0.28
RTN4-207ENST00000402434 TMEM54Q969K7 222 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 ZNF347Q96SE7 839 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 SEPHS2Q99611 448 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 MRPL13Q9BYD1 178 aaKnown RBP16.8■□□□□ 0.28
RTN4-207ENST00000402434 B3GAT2Q9NPZ5 323 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 GLTPQ9NZD2 209 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 TMEM5Q9Y2B1 443 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 PLEKHA6Q9Y2H5 1048 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 MAGED1Q9Y5V3 778 aaPredicted RBP16.8■□□□□ 0.28
RTN4-207ENST00000402434 RAI1Q7Z5J4 1906 aaPredicted RBP16.8■□□□□ 0.28
RTN4-207ENST00000402434 ARPC4-TTLL3A0A0A6YYG9 625 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 EFCAB9A8MZ26 197 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 ACOT8O14734 319 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 ATE1O95260 518 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 WNT11O96014 354 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 PGA4P0DJD7 388 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 PGA3P0DJD8 388 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 PTAFRP25105 342 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 MAGEA2P43356 314 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 CSNK1A1P48729 337 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 BNIP1Q12981 228 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 MELKQ14680 651 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 SEC23BQ15437 767 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 ACKR1Q16570 336 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 DNAL1Q4LDG9 190 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 ALG10Q5BKT4 473 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 FGD3Q5JSP0 725 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 ARMC4Q5T2S8 1044 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 PGM2L1Q6PCE3 622 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 KLHL17Q6TDP4 642 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 TMEM108Q6UXF1 575 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 MEX3DQ86XN8 651 aaKnown RBP16.8■□□□□ 0.28
RTN4-207ENST00000402434 ZDHHC21Q8IVQ6 265 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 LRRC75AQ8NAA5 344 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 LILRB1Q8NHL6 650 aaPredicted RBP16.8■□□□□ 0.28
RTN4-207ENST00000402434 ZNF566Q969W8 418 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 MBD6Q96DN6 1003 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 TNFRSF13CQ96RJ3 184 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 BTBD10Q9BSF8 475 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 ULBP2Q9BZM5 246 aa16.8■□□□□ 0.28
RTN4-207ENST00000402434 CCM2LQ9NUG4 571 aaPredicted RBP16.8■□□□□ 0.28
RTN4-207ENST00000402434 PLCE1Q9P212 2302 aa16.79■□□□□ 0.28
RTN4-207ENST00000402434 CENPBD1B2RD01 187 aa16.79■□□□□ 0.28
RTN4-207ENST00000402434 GADD45GO95257 159 aa16.79■□□□□ 0.28
RTN4-207ENST00000402434 CD53P19397 219 aa16.79■□□□□ 0.28
RTN4-207ENST00000402434 DNASE1P24855 282 aa16.79■□□□□ 0.28
RTN4-207ENST00000402434 OMPP47874 163 aa16.79■□□□□ 0.28
RTN4-207ENST00000402434 LIMS1P48059 325 aa16.79■□□□□ 0.28
RTN4-207ENST00000402434 DAP3P51398 398 aaKnown RBP16.79■□□□□ 0.28
RTN4-207ENST00000402434 ZNF83P51522 516 aa16.79■□□□□ 0.28
RTN4-207ENST00000402434 TRAP1Q12931 704 aaKnown RBP16.79■□□□□ 0.28
RTN4-207ENST00000402434 KEAP1Q14145 624 aa16.79■□□□□ 0.28
RTN4-207ENST00000402434 HIST3H3Q16695 136 aa16.79■□□□□ 0.28
RTN4-207ENST00000402434 LRFN4Q6PJG9 635 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms