RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 LIPNQ5VXI9 398 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 TMEM220Q6QAJ8 160 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 SLC22A25Q6T423 547 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 PLPP5Q8NEB5 264 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 FOXJ1Q92949 421 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 RAB7BQ96AH8 199 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 NAA11Q9BSU3 229 aaPredicted RBP12.68□□□□□ -0.38
RUNX3-203ENST00000399916 PLA2G12AQ9BZM1 189 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.68□□□□□ -0.38
RUNX3-203ENST00000399916 OR52D1Q9H346 318 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 C11orf49Q9H6J7 331 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 IL26Q9NPH9 171 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 MCIDASD6RGH6 385 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 IGFALSP35858 605 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 PKIAP61925 76 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 SMAD3P84022 425 aaKnown RBP12.68□□□□□ -0.38
RUNX3-203ENST00000399916 KIAA0040Q15053 153 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 THNSL2Q86YJ6 484 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 SENP5Q96HI0 755 aaPredicted RBP12.68□□□□□ -0.38
RUNX3-203ENST00000399916 TRIB3Q96RU7 358 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 HINT3Q9NQE9 182 aaKnown RBP12.68□□□□□ -0.38
RUNX3-203ENST00000399916 LAMP5Q9UJQ1 280 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 RBM7Q9Y580 266 aaKnown RBP12.68□□□□□ -0.38
RUNX3-203ENST00000399916 RFPL4AA6NLU0 287 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 RFPL4AL1F8VTS6 287 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 IL33O95760 270 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 OR4E1P0C645 316 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 GLI4P10075 376 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 SPCS3P61009 180 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 ABCA11PQ4W5N1 156 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 TCTN3Q6NUS6 607 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 CALHM3Q86XJ0 350 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 DTD2Q96FN9 168 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 LUZP4Q9P127 313 aa12.68□□□□□ -0.38
RUNX3-203ENST00000399916 PCYT1BQ9Y5K3 369 aaPredicted RBP12.68□□□□□ -0.38
RUNX3-203ENST00000399916 GNRH1P01148 92 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 ASGR1P07306 291 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 CYCSP99999 105 aaKnown RBP12.67□□□□□ -0.38
RUNX3-203ENST00000399916 B3GNTL1Q67FW5 361 aaPredicted RBP12.67□□□□□ -0.38
RUNX3-203ENST00000399916 CPNE4Q96A23 557 aaPredicted RBP12.67□□□□□ -0.38
RUNX3-203ENST00000399916 FUBP3Q96I24 572 aaKnown RBP eCLIP12.67□□□□□ -0.38
RUNX3-203ENST00000399916 SNX22Q96L94 193 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 M0QZQ0 153 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 IL1RNP18510 177 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 C5AR1P21730 350 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 MMP15P51511 669 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 ID2Q02363 134 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 MEPCEQ7L2J0 689 aaKnown RBP12.67□□□□□ -0.38
RUNX3-203ENST00000399916 PRICKLE2Q7Z3G6 844 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 C15orf54Q8N8G6 183 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 TMEM104Q8NE00 496 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 LIN37Q96GY3 246 aaPredicted RBP12.67□□□□□ -0.38
RUNX3-203ENST00000399916 CDC6Q99741 560 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 SLC7A7Q9UM01 511 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 NPFFR2Q9Y5X5 522 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 SCN4AP35499 1836 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 DRGXA6NNA5 263 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 IRF4Q15306 451 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 VAMP3Q15836 100 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 ELFN2Q5R3F8 820 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 NIPAL3Q6P499 406 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 OR52E4Q8NGH9 312 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 OR56B1Q8NGI3 324 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 OR1J1Q8NGS3 322 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 PACRGQ96M98 296 aaPredicted RBP12.67□□□□□ -0.38
RUNX3-203ENST00000399916 FOXN4Q96NZ1 517 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 IL17FQ96PD4 163 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 FTSJ1Q9UET6 329 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 EPHA6Q9UF33 1036 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 SLC23A2Q9UGH3 650 aa12.67□□□□□ -0.38
RUNX3-203ENST00000399916 YY2O15391 372 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 SLC16A8O95907 504 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 HPP00738 406 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 SELLP14151 372 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 ABOP16442 354 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 GSK3AP49840 483 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 LIM2P55344 173 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 TAS2R20P59543 309 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 LSM11P83369 360 aaKnown RBP eCLIP12.66□□□□□ -0.38
RUNX3-203ENST00000399916 GLO1Q04760 184 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 TMEM173Q86WV6 379 aaPredicted RBP12.66□□□□□ -0.38
RUNX3-203ENST00000399916 COMMD1Q8N668 190 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 OR1J2Q8NGS2 313 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 EXTL1Q92935 676 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 SAMD10Q9BYL1 202 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 NEUROD4Q9HD90 331 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 PLSCR5A0PG75 271 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 MPTX1A8MV57 137 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 SNRPGP15A8MWD9 76 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 PEX12O00623 359 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 IDSP22304 550 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 FGF9P31371 208 aaPredicted RBP12.66□□□□□ -0.38
RUNX3-203ENST00000399916 RAB11BQ15907 218 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 AMZ1Q400G9 498 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 MLIPQ5VWP3 458 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 OR6K3Q8NGY3 331 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 SLC25A28Q96A46 364 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 RAB39BQ96DA2 213 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 PDXPQ96GD0 296 aa12.66□□□□□ -0.38
RUNX3-203ENST00000399916 RASL12Q9NYN1 266 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms