RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 DNASE2BQ8WZ79 361 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 SLC25A44Q96H78 314 aaPredicted RBP12.78□□□□□ -0.36
SCAF4-202ENST00000399804 MAN2C1Q9NTJ4 1040 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 OCIAD1Q9NX40 245 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 R4GN57 208 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 MEGF11A6BM72 1044 aa12.77□□□□□ -0.36
SCAF4-202ENST00000399804 GATBO75879 557 aaKnown RBP12.77□□□□□ -0.36
SCAF4-202ENST00000399804 KDM4BO94953 1096 aa12.77□□□□□ -0.36
SCAF4-202ENST00000399804 CD3GP09693 182 aa12.77□□□□□ -0.36
SCAF4-202ENST00000399804 ZNF136P52737 540 aa12.77□□□□□ -0.36
SCAF4-202ENST00000399804 PLP2Q04941 152 aa12.77□□□□□ -0.36
SCAF4-202ENST00000399804 ZNF74Q16587 644 aa12.77□□□□□ -0.36
SCAF4-202ENST00000399804 PMS2CLQ68D20 193 aa12.77□□□□□ -0.36
SCAF4-202ENST00000399804 SFRP4Q6FHJ7 346 aaPredicted RBP12.77□□□□□ -0.36
SCAF4-202ENST00000399804 TMED4Q7Z7H5 227 aa12.77□□□□□ -0.36
SCAF4-202ENST00000399804 GPR119Q8TDV5 335 aa12.77□□□□□ -0.36
SCAF4-202ENST00000399804 VOPP1Q96AW1 172 aa12.77□□□□□ -0.36
SCAF4-202ENST00000399804 TP63Q9H3D4 680 aaPredicted RBP12.77□□□□□ -0.36
SCAF4-202ENST00000399804 SYNPO2LQ9H987 977 aa12.77□□□□□ -0.36
SCAF4-202ENST00000399804 ACAD8Q9UKU7 415 aa12.77□□□□□ -0.36
SCAF4-202ENST00000399804 MYLKQ15746 1914 aa12.77□□□□□ -0.36
SCAF4-202ENST00000399804 PLATP00750 562 aa12.77□□□□□ -0.36
SCAF4-202ENST00000399804 MTNR1BP49286 362 aa12.77□□□□□ -0.36
SCAF4-202ENST00000399804 ARG2P78540 354 aa12.77□□□□□ -0.36
SCAF4-202ENST00000399804 SFXN4Q6P4A7 337 aa12.77□□□□□ -0.36
SCAF4-202ENST00000399804 ST8SIA1Q92185 356 aa12.77□□□□□ -0.36
SCAF4-202ENST00000399804 NECAB3Q96P71 396 aaPredicted RBP12.77□□□□□ -0.36
SCAF4-202ENST00000399804 ULBP2Q9BZM5 246 aa12.77□□□□□ -0.36
SCAF4-202ENST00000399804 MMP25Q9NPA2 562 aa12.77□□□□□ -0.36
SCAF4-202ENST00000399804 TMEM74BQ9NUR3 256 aa12.77□□□□□ -0.36
SCAF4-202ENST00000399804 A0A1W2PPC1 479 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 SULT1C4O75897 302 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 PAHP00439 452 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 IGLV3-19P01714 112 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 LIMS3P0CW19 117 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 LIMS4P0CW20 117 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 CCL4P13236 92 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 GTF2F2P13984 249 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 LCN1P31025 176 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 NR4A2P43354 598 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 CYB561P49447 251 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 SLC35A1P78382 337 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 IL11RAQ14626 422 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 P2RY14Q15391 338 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 KCNJ8Q15842 424 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 TMEM244Q5VVB8 128 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 HBMQ6B0K9 141 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 FCRLAQ7L513 359 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 LRRC28Q86X40 367 aaPredicted RBP12.77□□□□□ -0.37
SCAF4-202ENST00000399804 MED29Q9NX70 200 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 RBM7Q9Y580 266 aaKnown RBP12.77□□□□□ -0.37
SCAF4-202ENST00000399804 PCDHGB2Q9Y5G2 931 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 TOX3O15405 576 aaPredicted RBP12.77□□□□□ -0.37
SCAF4-202ENST00000399804 TMEM201Q5SNT2 666 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 C3orf33Q6P1S2 294 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 ABHD12BQ7Z5M8 362 aaPredicted RBP12.77□□□□□ -0.37
SCAF4-202ENST00000399804 ANKRD37Q7Z713 158 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 TTC9Q92623 222 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 SLC25A46Q96AG3 418 aa12.77□□□□□ -0.37
SCAF4-202ENST00000399804 THAP7Q9BT49 309 aaPredicted RBP12.77□□□□□ -0.37
SCAF4-202ENST00000399804 ING1Q9UK53 422 aaPredicted RBP12.77□□□□□ -0.37
SCAF4-202ENST00000399804 BOKQ9UMX3 212 aaPredicted RBP12.77□□□□□ -0.37
SCAF4-202ENST00000399804 ALG1L2C9J202 215 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 DDAH2O95865 285 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 GMFBP60983 142 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 AADACL4Q5VUY2 407 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 LINC00299Q6ZSB3 139 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 NRARPQ7Z6K4 114 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 TRIM63Q969Q1 353 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 UTP23Q9BRU9 249 aaKnown RBP12.76□□□□□ -0.37
SCAF4-202ENST00000399804 A0A1B0GW55 424 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 SHISA8B8ZZ34 492 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 ACOT7O00154 380 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 DUX4L2P0CJ85 424 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 DUX4L3P0CJ86 424 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 DUX4L4P0CJ87 422 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 DUX4L5P0CJ88 424 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 DUX4L6P0CJ89 424 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 DUX4L7P0CJ90 424 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 SPOCK1Q08629 439 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 ALKBH1Q13686 389 aaKnown RBP12.76□□□□□ -0.37
SCAF4-202ENST00000399804 SLC25A25Q6KCM7 469 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 NDUFAF7Q7L592 441 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 SYT9Q86SS6 491 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 NPRL2Q8WTW4 380 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 DOK1Q99704 481 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 ZNF768Q9H5H4 540 aaKnown RBP12.76□□□□□ -0.37
SCAF4-202ENST00000399804 SIAEQ9HAT2 523 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 DUX4Q9UBX2 424 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 STK17BO94768 372 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 ERCC1P07992 297 aaPredicted RBP12.76□□□□□ -0.37
SCAF4-202ENST00000399804 GNG2P59768 71 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 HSF1Q00613 529 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 Q499Y3 187 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 TCEAL6Q6IPX3 200 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 ZNF770Q6IQ21 691 aaPredicted RBP12.76□□□□□ -0.37
SCAF4-202ENST00000399804 PRSS42Q7Z5A4 293 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 OR13C5Q8NGS8 318 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 TCEAL3Q969E4 200 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 TAAR8Q969N4 342 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms