RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 NAAAQ02083 359 aa12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 CHRNB3Q05901 458 aa12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 CAMK2DQ13557 499 aa12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 LRRC23Q53EV4 343 aaPredicted RBP12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 CARD17Q5XLA6 110 aa12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 DEF8Q6ZN54 512 aa12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 TUBA1AQ71U36 451 aa12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 SLC35D2Q76EJ3 337 aa12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 SLC46A3Q7Z3Q1 461 aa12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 SLC15A3Q8IY34 581 aa12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 OR6X1Q8NH79 312 aa12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 HOPXQ9BPY8 73 aaPredicted RBP12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 ULBP2Q9BZM5 246 aa12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 CMTM6Q9NX76 183 aa12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 RIMS3Q9UJD0 308 aa12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 CR1P17927 2039 aa12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 C11orf98E9PRG8 122 aa12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 RNF13O43567 381 aa12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 PDE5AO76074 875 aa12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 HIST1H2ABP04908 130 aa12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 ARR3P36575 388 aa12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 CSNK1A1P48729 337 aa12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 BIDP55957 195 aa12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 SELENOWP63302 87 aa12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 C8orf82Q6P1X6 216 aaPredicted RBP12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 HACD2Q6Y1H2 254 aa12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 Q71RC1 249 aaPredicted RBP12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 HIST3H2AQ7L7L0 130 aa12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 NANOGNBQ7Z5D8 188 aa12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 WDFY1Q8IWB7 410 aa12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 LRRC17Q8N6Y2 441 aa12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 IL17RDQ8NFM7 739 aa12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 OR4F15Q8NGB8 312 aa12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 OR6N1Q8NGY5 312 aa12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 LIPHQ8WWY8 451 aa12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 LZICQ8WZA0 190 aa12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 HIST1H2ACQ93077 130 aa12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 EFCAB1Q9HAE3 211 aa12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 CA10Q9NS85 328 aa12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 POFUT2Q9Y2G5 429 aa12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 PMF1-BGLAPU3KQ54 211 aa12.93□□□□□ -0.34
SMIM11A-203ENST00000399299 ZNF503-AS2A6NEH8 195 aa12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 NDUFAB1O14561 156 aa12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 SERPINI2O75830 405 aa12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 SEC14L2O76054 403 aa12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 UMPSP11172 480 aa12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 OR1E2P47887 323 aa12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 NUDT6P53370 316 aa12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 UGT2B15P54855 530 aa12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 LIPEQ05469 1076 aa12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 PIN1Q13526 163 aaPredicted RBP12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 RAB35Q15286 201 aa12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 SWI5Q1ZZU3 235 aa12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 ZNF813Q6ZN06 617 aa12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 SPATA21Q7Z572 469 aa12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 TREML1Q86YW5 311 aa12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 NKAIN4Q8IVV8 208 aa12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 NUP37Q8NFH4 326 aa12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 TMEM255BQ8WV15 326 aa12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 TMEM239Q8WW34 195 aa12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 TMEM54Q969K7 222 aa12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 ZNF566Q969W8 418 aa12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 SLC25A44Q96H78 314 aaPredicted RBP12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 FOXB1Q99853 325 aa12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 REG4Q9BYZ8 158 aa12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 DENND2DQ9H6A0 471 aaPredicted RBP12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 B3GNT2Q9NY97 397 aa12.92□□□□□ -0.34
SMIM11A-203ENST00000399299 HTR3EA5X5Y0 456 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 RNF223E7ERA6 249 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 NME4O00746 187 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 SSX4O60224 188 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 SHOX2O60902 331 aaPredicted RBP12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 ENTPD5O75356 428 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 OR7A10O76100 309 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 CELA3BP08861 270 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 TSPAN19P0C672 248 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 CALCRP30988 508 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 IFNA8P32881 189 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 CAPZA2P47755 286 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 IDH3GP51553 393 aaPredicted RBP12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 SLC7A2P52569 658 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 DSCR9P59020 149 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 ST3GAL3Q11203 375 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 MST1LQ2TV78 715 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 MDP1Q86V88 176 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 MYPOPQ86VE0 399 aaPredicted RBP12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 NANOS1Q8WY41 292 aaKnown RBP12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 FBXO17Q96EF6 278 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 SGTBQ96EQ0 304 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 TPD52L3Q96J77 140 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 PRRC1Q96M27 445 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 MYLK2Q9H1R3 596 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 ZNF442Q9H7R0 627 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 SEC61A2Q9H9S3 476 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 GLTPQ9NZD2 209 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 FBXO9Q9UK97 447 aaPredicted RBP12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 A4GNTQ9UNA3 340 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 MED31Q9Y3C7 131 aa12.91□□□□□ -0.34
SMIM11A-203ENST00000399299 IGHV2OR16-5A0A0B4J2B6 119 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 NPIPB13A6NJU9 1138 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms