RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 J3QRE1 110 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 GPX5O75715 221 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 GOSR1O95249 250 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 BGLAPP02818 100 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 IL11P20809 199 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 PSPHP78330 225 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 NTRK2Q16620 822 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 LYPD4Q6UWN0 246 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 DPY19L2P2Q6ZN68 376 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 GRINAQ7Z429 371 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 USB1Q9BQ65 265 aaKnown RBP13.68□□□□□ -0.22
COL25A1-201ENST00000399126 NCOR1P1Q9H4R4 102 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 OR6C68A6NDL8 312 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 M0R3G1 203 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 SMPD2O60906 423 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 IGHA1P01876 353 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 UQCRC1P31930 480 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 DIO1P49895 249 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 POLR2HP52434 150 aaKnown RBP13.68□□□□□ -0.22
COL25A1-201ENST00000399126 HCCSP53701 268 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 WNT4P56705 351 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 GPR85P60893 370 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 Q0VFX4 171 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 TCF15Q12870 199 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 ALG10Q5BKT4 473 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 C19orf48Q6RUI8 117 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 LINC00299Q6ZSB3 139 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 RFLNBQ8N5W9 214 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 ZNF485Q8NCK3 441 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 ATP6V1C2Q8NEY4 427 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 DYNC2LI1Q8TCX1 351 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 LIPHQ8WWY8 451 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 TMEM203Q969S6 136 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 ZMYND19Q96E35 227 aaPredicted RBP13.68□□□□□ -0.22
COL25A1-201ENST00000399126 TTTY10Q9BZA0 68 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 RERGLQ9H628 205 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 ISG20L2Q9H9L3 353 aaKnown RBP13.68□□□□□ -0.22
COL25A1-201ENST00000399126 ERVK13-1Q9NX77 482 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 PPP4R1LQ9P1A2 415 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 FBXL2Q9UKC9 423 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 BAIAP2Q9UQB8 552 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 SPIN1Q9Y657 262 aaPredicted RBP13.68□□□□□ -0.22
COL25A1-201ENST00000399126 CHCHD2Q9Y6H1 151 aaPredicted RBP13.68□□□□□ -0.22
COL25A1-201ENST00000399126 CACNA1CQ13936 2221 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 GVINP1Q7Z2Y8 2422 aa13.68□□□□□ -0.22
COL25A1-201ENST00000399126 ANKUB1A6NFN9 424 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 H7C1C5 153 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 SULT1B1O43704 296 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 NPIPB7O75200 414 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 SLC25A12O75746 678 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 PAICSP22234 425 aaKnown RBP13.67□□□□□ -0.22
COL25A1-201ENST00000399126 GSK3AP49840 483 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 CTXN1P60606 82 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 LCN6P62502 163 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 FOXF1Q12946 379 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 TMEM44Q2T9K0 475 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 NDUFAF7Q7L592 441 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.67□□□□□ -0.22
COL25A1-201ENST00000399126 NPEPL1Q8NDH3 523 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 OR5M1Q8NGP8 315 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 ZHX1-C8orf76Q96EF9 292 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 TSSK2Q96PF2 358 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 TIMP4Q99727 224 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 CDC6Q99741 560 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 DDA1Q9BW61 102 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 RACGAP1Q9H0H5 632 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 DCSTAMPQ9H295 470 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 CDCP1Q9H5V8 836 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 EXOSC1Q9Y3B2 195 aaKnown RBP13.67□□□□□ -0.22
COL25A1-201ENST00000399126 WIF1Q9Y5W5 379 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 MRPS18BQ9Y676 258 aaKnown RBP13.67□□□□□ -0.22
COL25A1-201ENST00000399126 MED13Q9UHV7 2174 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 TMEM129A0AVI4 362 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 FAM171A2A8MVW0 826 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 C11orf98E9PRG8 122 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 G3V3Y1 287 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 CDKN2AP42771 156 aaKnown RBP13.67□□□□□ -0.22
COL25A1-201ENST00000399126 PRPS1P60891 318 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 C1DQ13901 141 aaKnown RBP13.67□□□□□ -0.22
COL25A1-201ENST00000399126 TRIP6Q15654 476 aaKnown RBP13.67□□□□□ -0.22
COL25A1-201ENST00000399126 EXT1Q16394 746 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 ZNF468Q5VIY5 522 aaPredicted RBP13.67□□□□□ -0.22
COL25A1-201ENST00000399126 FAM122BQ7Z309 247 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 MISPQ8IVT2 679 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 PHC2Q8IXK0 858 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 OR10H4Q8NGA5 316 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 DDOQ99489 341 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 BCL7BQ9BQE9 202 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 GHITMQ9H3K2 345 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 ADGRL4Q9HBW9 690 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 ASB6Q9NWX5 421 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 ANKRD10Q9NXR5 420 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 CEP250Q9BV73 2442 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 TRAV36DV7A0A075B6V5 113 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 TSC22D2O75157 780 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 PLGP00747 810 aaPredicted RBP13.67□□□□□ -0.22
COL25A1-201ENST00000399126 IFNGP01579 166 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 OPN1LWP04000 364 aa13.67□□□□□ -0.22
COL25A1-201ENST00000399126 MLLT11Q13015 90 aaPredicted RBP13.67□□□□□ -0.22
COL25A1-201ENST00000399126 IL10RAQ13651 578 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms