RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 C17orf78Q8N4C9 275 aa22.28■■□□□ 1.16
TSPAN4-207ENST00000397411 OR4K5Q8NGD3 323 aa22.28■■□□□ 1.16
TSPAN4-207ENST00000397411 ZNF566Q969W8 418 aa22.28■■□□□ 1.16
TSPAN4-207ENST00000397411 FAM46AQ96IP4 442 aaKnown RBP22.28■■□□□ 1.16
TSPAN4-207ENST00000397411 TNFRSF13CQ96RJ3 184 aa22.28■■□□□ 1.16
TSPAN4-207ENST00000397411 SLC17A5Q9NRA2 495 aa22.28■■□□□ 1.16
TSPAN4-207ENST00000397411 POFUT2Q9Y2G5 429 aa22.28■■□□□ 1.16
TSPAN4-207ENST00000397411 AMDHD2Q9Y303 409 aa22.28■■□□□ 1.16
TSPAN4-207ENST00000397411 SIAH2O43255 324 aa22.27■■□□□ 1.16
TSPAN4-207ENST00000397411 WNT11O96014 354 aa22.27■■□□□ 1.16
TSPAN4-207ENST00000397411 SH3BGRP55822 239 aaPredicted RBP22.27■■□□□ 1.16
TSPAN4-207ENST00000397411 CLRN1P58418 232 aa22.27■■□□□ 1.16
TSPAN4-207ENST00000397411 PRPS1P60891 318 aa22.27■■□□□ 1.16
TSPAN4-207ENST00000397411 ARF1P84077 181 aaKnown RBP22.27■■□□□ 1.16
TSPAN4-207ENST00000397411 CEACAM16Q2WEN9 425 aa22.27■■□□□ 1.16
TSPAN4-207ENST00000397411 IQCCQ4KMZ1 466 aa22.27■■□□□ 1.16
TSPAN4-207ENST00000397411 PRR14LQ5THK1 2151 aa22.27■■□□□ 1.16
TSPAN4-207ENST00000397411 KLHL17Q6TDP4 642 aa22.27■■□□□ 1.16
TSPAN4-207ENST00000397411 TMPRSS11FQ6ZWK6 438 aa22.27■■□□□ 1.16
TSPAN4-207ENST00000397411 LINGO2Q7L985 606 aa22.27■■□□□ 1.16
TSPAN4-207ENST00000397411 OR1K1Q8NGR3 316 aa22.27■■□□□ 1.16
TSPAN4-207ENST00000397411 OR13C2Q8NGS9 318 aa22.27■■□□□ 1.16
TSPAN4-207ENST00000397411 SLC25A44Q96H78 314 aaPredicted RBP22.27■■□□□ 1.16
TSPAN4-207ENST00000397411 DHRS1Q96LJ7 313 aa22.27■■□□□ 1.16
TSPAN4-207ENST00000397411 ALPK1Q96QP1 1244 aa22.27■■□□□ 1.16
TSPAN4-207ENST00000397411 ULBP2Q9BZM5 246 aa22.27■■□□□ 1.16
TSPAN4-207ENST00000397411 HIF3AQ9Y2N7 669 aa22.27■■□□□ 1.16
TSPAN4-207ENST00000397411 ITPR2Q14571 2701 aa22.27■■□□□ 1.16
TSPAN4-207ENST00000397411 TRAV27A0A087WT01 109 aa22.26■■□□□ 1.15
TSPAN4-207ENST00000397411 RPL36A-HNRNPH2H7BZ11 118 aa22.26■■□□□ 1.15
TSPAN4-207ENST00000397411 ACOT8O14734 319 aa22.26■■□□□ 1.15
TSPAN4-207ENST00000397411 KRT36O76013 467 aa22.26■■□□□ 1.15
TSPAN4-207ENST00000397411 RPL4P36578 427 aaKnown RBP22.26■■□□□ 1.15
TSPAN4-207ENST00000397411 IFNGR2P38484 337 aa22.26■■□□□ 1.15
TSPAN4-207ENST00000397411 CTXN1P60606 82 aa22.26■■□□□ 1.15
TSPAN4-207ENST00000397411 FLOT2Q14254 428 aa22.26■■□□□ 1.15
TSPAN4-207ENST00000397411 ZBED5Q49AG3 693 aa22.26■■□□□ 1.15
TSPAN4-207ENST00000397411 HIKESHIQ53FT3 197 aa22.26■■□□□ 1.15
TSPAN4-207ENST00000397411 ANKRD16Q6P6B7 361 aa22.26■■□□□ 1.15
TSPAN4-207ENST00000397411 PGM2L1Q6PCE3 622 aa22.26■■□□□ 1.15
TSPAN4-207ENST00000397411 SPATA24Q86W54 205 aa22.26■■□□□ 1.15
TSPAN4-207ENST00000397411 C1QTNF6Q9BXI9 259 aa22.26■■□□□ 1.15
TSPAN4-207ENST00000397411 STX18Q9P2W9 335 aaKnown RBP22.26■■□□□ 1.15
TSPAN4-207ENST00000397411 MAGED1Q9Y5V3 778 aaPredicted RBP22.26■■□□□ 1.15
TSPAN4-207ENST00000397411 A0A096LPE4 126 aa22.25■■□□□ 1.15
TSPAN4-207ENST00000397411 A0A1W2PPZ6 126 aa22.25■■□□□ 1.15
TSPAN4-207ENST00000397411 SH3PXD2BA1X283 911 aa22.25■■□□□ 1.15
TSPAN4-207ENST00000397411 OR10H3O60404 316 aa22.25■■□□□ 1.15
TSPAN4-207ENST00000397411 IGHG1P01857 330 aa22.25■■□□□ 1.15
TSPAN4-207ENST00000397411 CD3EP07766 207 aa22.25■■□□□ 1.15
TSPAN4-207ENST00000397411 ZNF83P51522 516 aa22.25■■□□□ 1.15
TSPAN4-207ENST00000397411 TOP3AQ13472 1001 aaPredicted RBP22.25■■□□□ 1.15
TSPAN4-207ENST00000397411 SEC23BQ15437 767 aa22.25■■□□□ 1.15
TSPAN4-207ENST00000397411 ACKR1Q16570 336 aa22.25■■□□□ 1.15
TSPAN4-207ENST00000397411 PHYHD1Q5SRE7 291 aa22.25■■□□□ 1.15
TSPAN4-207ENST00000397411 CDH24Q86UP0 819 aa22.25■■□□□ 1.15
TSPAN4-207ENST00000397411 WDR31Q8NA23 367 aa22.25■■□□□ 1.15
TSPAN4-207ENST00000397411 NRGNQ92686 78 aa22.25■■□□□ 1.15
TSPAN4-207ENST00000397411 CADM1Q9BY67 442 aaKnown RBP22.25■■□□□ 1.15
TSPAN4-207ENST00000397411 GLTPQ9NZD2 209 aa22.25■■□□□ 1.15
TSPAN4-207ENST00000397411 SLC25A15Q9Y619 301 aa22.25■■□□□ 1.15
TSPAN4-207ENST00000397411 AQP12BA6NM10 295 aa22.24■■□□□ 1.15
TSPAN4-207ENST00000397411 TNFRSF11BO00300 401 aa22.24■■□□□ 1.15
TSPAN4-207ENST00000397411 TBRG1Q3YBR2 411 aa22.24■■□□□ 1.15
TSPAN4-207ENST00000397411 C1QTNF12Q5T7M4 302 aa22.24■■□□□ 1.15
TSPAN4-207ENST00000397411 IGFN1Q86VF2 1251 aa22.24■■□□□ 1.15
TSPAN4-207ENST00000397411 AQP12AQ8IXF9 295 aa22.24■■□□□ 1.15
TSPAN4-207ENST00000397411 BCL2L2Q92843 193 aaPredicted RBP22.24■■□□□ 1.15
TSPAN4-207ENST00000397411 TMEM54Q969K7 222 aa22.24■■□□□ 1.15
TSPAN4-207ENST00000397411 HS3ST6Q96QI5 342 aa22.24■■□□□ 1.15
TSPAN4-207ENST00000397411 TXNIPQ9H3M7 391 aa22.24■■□□□ 1.15
TSPAN4-207ENST00000397411 UNC119BA6NIH7 251 aa22.23■■□□□ 1.15
TSPAN4-207ENST00000397411 ZNF99A8MXY4 864 aaPredicted RBP22.23■■□□□ 1.15
TSPAN4-207ENST00000397411 M0R1B8 84 aa22.23■■□□□ 1.15
TSPAN4-207ENST00000397411 CDC42EP2O14613 210 aa22.23■■□□□ 1.15
TSPAN4-207ENST00000397411 TSPAN19P0C672 248 aa22.23■■□□□ 1.15
TSPAN4-207ENST00000397411 RAP2AP10114 183 aa22.23■■□□□ 1.15
TSPAN4-207ENST00000397411 ACADSP16219 412 aa22.23■■□□□ 1.15
TSPAN4-207ENST00000397411 CBX1P83916 185 aa22.23■■□□□ 1.15
TSPAN4-207ENST00000397411 NCMAPQ5T1S8 102 aa22.23■■□□□ 1.15
TSPAN4-207ENST00000397411 CCDC121Q6ZUS5 278 aa22.23■■□□□ 1.15
TSPAN4-207ENST00000397411 SYT14Q8NB59 555 aa22.23■■□□□ 1.15
TSPAN4-207ENST00000397411 ASB10Q8WXI3 467 aa22.23■■□□□ 1.15
TSPAN4-207ENST00000397411 ZNF837Q96EG3 531 aaPredicted RBP22.23■■□□□ 1.15
TSPAN4-207ENST00000397411 UBTD1Q9HAC8 227 aa22.23■■□□□ 1.15
TSPAN4-207ENST00000397411 OBP2BQ9NPH6 170 aa22.23■■□□□ 1.15
TSPAN4-207ENST00000397411 POMPQ9Y244 141 aa22.23■■□□□ 1.15
TSPAN4-207ENST00000397411 HOXB1P14653 301 aaPredicted RBP22.22■■□□□ 1.15
TSPAN4-207ENST00000397411 CAPZA2P47755 286 aa22.22■■□□□ 1.15
TSPAN4-207ENST00000397411 OMPP47874 163 aa22.22■■□□□ 1.15
TSPAN4-207ENST00000397411 RPL27P61353 136 aaKnown RBP22.22■■□□□ 1.15
TSPAN4-207ENST00000397411 BSPH1Q075Z2 132 aa22.22■■□□□ 1.15
TSPAN4-207ENST00000397411 TMEM108Q6UXF1 575 aa22.22■■□□□ 1.15
TSPAN4-207ENST00000397411 ZNF704Q6ZNC4 412 aaPredicted RBP22.22■■□□□ 1.15
TSPAN4-207ENST00000397411 WDFY1Q8IWB7 410 aa22.22■■□□□ 1.15
TSPAN4-207ENST00000397411 RSRC1Q96IZ7 334 aaKnown RBP22.22■■□□□ 1.15
TSPAN4-207ENST00000397411 PLEKHF2Q9H8W4 249 aa22.22■■□□□ 1.15
TSPAN4-207ENST00000397411 ITGB1BP2Q9UKP3 347 aa22.22■■□□□ 1.15
TSPAN4-207ENST00000397411 ZNF346Q9UL40 294 aaKnown RBP22.22■■□□□ 1.15
TSPAN4-207ENST00000397411 RNF115Q9Y4L5 304 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms