RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 ATP23Q9Y6H3 246 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 PMF1-BGLAPU3KQ54 211 aa12.17□□□□□ -0.46
SEC13-204ENST00000397099 A0A1W2PRG6 482 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 NPIPB13A6NJU9 1138 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 NPIPB4C9JG80 1138 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 H7C417 338 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 M0R3G1 203 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 SNX3O60493 162 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 GMNNO75496 209 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 HPRP00739 348 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 THY1P04216 161 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 IFNW1P05000 195 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 HLA-DOBP13765 273 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 CBR1P16152 277 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 LSP1P33241 339 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 CSNK1A1P48729 337 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 NUDT2P50583 147 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 DAP3P51398 398 aaKnown RBP12.16□□□□□ -0.46
SEC13-204ENST00000397099 SLC25A3Q00325 362 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 LIPEQ05469 1076 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 ANKDD1AQ495B1 522 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 C8orf82Q6P1X6 216 aaPredicted RBP12.16□□□□□ -0.46
SEC13-204ENST00000397099 WDR88Q6ZMY6 472 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 SLC35D2Q76EJ3 337 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 LINGO2Q7L985 606 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 PIWIL3Q7Z3Z3 882 aaKnown RBP12.16□□□□□ -0.46
SEC13-204ENST00000397099 DPPA2Q7Z7J5 298 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 ZNF566Q969W8 418 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 TPD52L3Q96J77 140 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 PRRC1Q96M27 445 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 C1QTNF6Q9BXI9 259 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 MYLK2Q9H1R3 596 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 SPAG4Q9NPE6 437 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 CMTM6Q9NX76 183 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 TAS2R5Q9NYW4 299 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 ABCD2Q9UBJ2 740 aa12.16□□□□□ -0.46
SEC13-204ENST00000397099 ALPK2Q86TB3 2170 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 A0A096LPE4 126 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 IGHV1-18A0A0C4DH31 117 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 A0A1W2PPZ6 126 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 C11orf98E9PRG8 122 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 CXCR6O00574 342 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 OR7A10O76100 309 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 BCL10O95999 233 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 CD8AP01732 235 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 IGHG1P01857 330 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 IFNGR1P15260 489 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 SLC7A2P52569 658 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 LGALS3BPQ08380 585 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 PIN1Q13526 163 aaPredicted RBP12.15□□□□□ -0.46
SEC13-204ENST00000397099 RAB35Q15286 201 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 TAF11Q15544 211 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 CLEC12BQ2HXU8 276 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 NRN1LQ496H8 165 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 C11orf71Q6IPW1 123 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 CYP4Z1Q86W10 505 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 RNF113BQ8IZP6 322 aaKnown RBP12.15□□□□□ -0.46
SEC13-204ENST00000397099 NUP37Q8NFH4 326 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 SGTBQ96EQ0 304 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 EMC6Q9BV81 110 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 MED29Q9NX70 200 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 NDE1Q9NXR1 346 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 GLTPQ9NZD2 209 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 RPS6KA6Q9UK32 745 aa12.15□□□□□ -0.46
SEC13-204ENST00000397099 LRRN3E7EW58 273 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 BLOC1S5-TXNDC5H3BN57 136 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 KPNA4O00629 521 aaPredicted RBP12.14□□□□□ -0.47
SEC13-204ENST00000397099 DCTN3O75935 186 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 UBL3O95164 117 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 TSPAN19P0C672 248 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 FUT1P19526 365 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 PCSK6P29122 969 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 OR1E2P47887 323 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 BIDP55957 195 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 NAAAQ02083 359 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 CAMK2DQ13557 499 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 IFI44LQ53G44 452 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 CARD17Q5XLA6 110 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 ZNF813Q6ZN06 617 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 CBLL1Q75N03 491 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 TSPYL5Q86VY4 417 aaPredicted RBP12.14□□□□□ -0.47
SEC13-204ENST00000397099 TREML1Q86YW5 311 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 CDK20Q8IZL9 346 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 OFCC1Q8IZS5 231 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 FNDC8Q8TC99 324 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 TMEM54Q969K7 222 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 FOXB1Q99853 325 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 KCTD14Q9BQ13 255 aaPredicted RBP12.14□□□□□ -0.47
SEC13-204ENST00000397099 FNDC11Q9BVV2 318 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 CACNG6Q9BXT2 260 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 NELFAQ9H3P2 528 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 ANKRD19PQ9H560 264 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 MEPEQ9NQ76 525 aaPredicted RBP12.14□□□□□ -0.47
SEC13-204ENST00000397099 CA10Q9NS85 328 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 MOKQ9UQ07 419 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 SPEF1Q9Y4P9 236 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 TLN2Q9Y4G6 2542 aa12.14□□□□□ -0.47
SEC13-204ENST00000397099 B9A039 149 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 MCIDASD6RGH6 385 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 ATP6V1G2-DDX39BF2Z307 99 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms