RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 ICAM5Q9UMF0 924 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 ZNF608Q9ULD9 1512 aaPredicted RBP4.21□□□□□ -1.74
GABPB1-204ENST00000396464 ADAMTS12P58397 1594 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 GRIN2BQ13224 1484 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 FAM231BA6NCW3 169 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 TRDCB7Z8K6 153 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 TCP10L2B9ZVM9 353 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 SULT1C2O00338 296 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 HAT1O14929 419 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 DENRO43583 198 aaKnown RBP4.21□□□□□ -1.74
GABPB1-204ENST00000396464 CDK2AP2O75956 126 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 CIAO1O76071 339 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 BAG4O95429 457 aaKnown RBP4.21□□□□□ -1.74
GABPB1-204ENST00000396464 PSMG1O95456 288 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 OXSR1O95747 527 aaPredicted RBP4.21□□□□□ -1.74
GABPB1-204ENST00000396464 LINC00271P0C7V0 271 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 PRPS1L1P21108 318 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 CA6P23280 308 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 CERS1P27544 350 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 CLDN6P56747 220 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 RIPK4P57078 832 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 CXCR4P61073 352 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 RPL8P62917 257 aaKnown RBP4.21□□□□□ -1.74
GABPB1-204ENST00000396464 ZNF85Q03923 595 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 MGAT3Q09327 533 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 GPR17Q13304 367 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 PDK2Q15119 407 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 ZNHIT3Q15649 155 aaPredicted RBP4.21□□□□□ -1.74
GABPB1-204ENST00000396464 ATP6V1FQ16864 119 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 TMEM249Q2WGJ8 235 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 FFAR4Q5NUL3 377 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 MARCH8Q5T0T0 291 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 IDNKQ5T6J7 187 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 OR8G2PQ6IF36 304 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 EMBQ6PCB8 327 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 TMEM207Q6UWW9 146 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 SSX6Q7RTT6 188 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 SLC13A5Q86YT5 568 aaPredicted RBP4.21□□□□□ -1.74
GABPB1-204ENST00000396464 PGAM4Q8N0Y7 254 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 PGBD5Q8N414 524 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 C2orf73Q8N5S3 287 aaPredicted RBP4.21□□□□□ -1.74
GABPB1-204ENST00000396464 RBMXL3Q8N7X1 1067 aaKnown RBP4.21□□□□□ -1.74
GABPB1-204ENST00000396464 ZNF383Q8NA42 475 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 MDS2Q8NDY4 140 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 OR1K1Q8NGR3 316 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 OR5K2Q8NHB8 316 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 UFD1Q92890 307 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 CDS1Q92903 461 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 RAB3CQ96E17 227 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 OMA1Q96E52 524 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 URB1-AS1Q96HZ7 61 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 ITCHQ96J02 903 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 PACRGQ96M98 296 aaPredicted RBP4.21□□□□□ -1.74
GABPB1-204ENST00000396464 PSD2Q9BQI7 771 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 PAPOLGQ9BWT3 736 aaKnown RBP4.21□□□□□ -1.74
GABPB1-204ENST00000396464 ELOVL4Q9GZR5 314 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 PORCNQ9H237 461 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 NLE1Q9NVX2 485 aaPredicted RBP4.21□□□□□ -1.74
GABPB1-204ENST00000396464 TEX10Q9NXF1 929 aaPredicted RBP4.21□□□□□ -1.74
GABPB1-204ENST00000396464 CYB5R1Q9UHQ9 305 aa4.21□□□□□ -1.74
GABPB1-204ENST00000396464 UBQLN1Q9UMX0 589 aaKnown RBP4.21□□□□□ -1.74
GABPB1-204ENST00000396464 MN1Q10571 1320 aaPredicted RBP4.2□□□□□ -1.74
GABPB1-204ENST00000396464 ERICH3Q5RHP9 1530 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 hCG_38984A0A1B0GV85 526 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 ASPDHA6ND91 283 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 VSTM2BA6NLU5 285 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 PP2D1A8MPX8 630 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 TMEM114B3SHH9 223 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 H0YJX3 145 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 GFYI3L273 518 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 hCG_2039718K7EN88 272 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 SLC1A7O00341 560 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 DCTN6O00399 190 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 SLC9A3R1O14745 358 aaPredicted RBP4.2□□□□□ -1.74
GABPB1-204ENST00000396464 DUSP11O75319 330 aaKnown RBP4.2□□□□□ -1.74
GABPB1-204ENST00000396464 MPDU1O75352 247 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 FABP1P07148 127 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 RHOCP08134 193 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 RPS17P08708 135 aaKnown RBP4.2□□□□□ -1.74
GABPB1-204ENST00000396464 HOXD4P09016 255 aaPredicted RBP4.2□□□□□ -1.74
GABPB1-204ENST00000396464 FGF9P31371 208 aaPredicted RBP4.2□□□□□ -1.74
GABPB1-204ENST00000396464 RANBP1P43487 201 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 OR3A2P47893 321 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 ZFP36L2P47974 494 aaKnown RBP4.2□□□□□ -1.74
GABPB1-204ENST00000396464 AMTP48728 403 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 DNASE1L1P49184 302 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 DAP3P51398 398 aaKnown RBP4.2□□□□□ -1.74
GABPB1-204ENST00000396464 RPS14P62263 151 aaKnown RBP4.2□□□□□ -1.74
GABPB1-204ENST00000396464 RPL24P83731 157 aaKnown RBP4.2□□□□□ -1.74
GABPB1-204ENST00000396464 ZNF91Q05481 1191 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 TMEM187Q14656 261 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 SF3A2Q15428 464 aaKnown RBP4.2□□□□□ -1.74
GABPB1-204ENST00000396464 NDUFA9Q16795 377 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 SLC36A2Q495M3 483 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 C2CD6Q53TS8 623 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 CARD16Q5EG05 197 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 VWA2Q5GFL6 755 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 TIMM23BQ5SRD1 257 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 CEP85LQ5SZL2 805 aa4.2□□□□□ -1.74
GABPB1-204ENST00000396464 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms