RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 LRRC75AQ8NAA5 344 aa17.5■□□□□ 0.39
SNCA-203ENST00000394986 OR4C15Q8NGM1 316 aa17.5■□□□□ 0.39
SNCA-203ENST00000394986 POP5Q969H6 163 aaKnown RBP17.5■□□□□ 0.39
SNCA-203ENST00000394986 UTP4Q969X6 686 aaKnown RBP17.5■□□□□ 0.39
SNCA-203ENST00000394986 GPR35Q9HC97 309 aa17.5■□□□□ 0.39
SNCA-203ENST00000394986 ZNF226Q9NYT6 803 aa17.5■□□□□ 0.39
SNCA-203ENST00000394986 TMCC3Q9ULS5 477 aa17.5■□□□□ 0.39
SNCA-203ENST00000394986 U3KQV3 271 aa17.5■□□□□ 0.39
SNCA-203ENST00000394986 OR5H1A6NKK0 313 aa17.49■□□□□ 0.39
SNCA-203ENST00000394986 DEFB108AA8MXU0 73 aa17.49■□□□□ 0.39
SNCA-203ENST00000394986 MCIDASD6RGH6 385 aa17.49■□□□□ 0.39
SNCA-203ENST00000394986 KLF4O43474 513 aa17.49■□□□□ 0.39
SNCA-203ENST00000394986 CTAG2O75638 210 aa17.49■□□□□ 0.39
SNCA-203ENST00000394986 BCL10O95999 233 aa17.49■□□□□ 0.39
SNCA-203ENST00000394986 SLC9A3P48764 834 aa17.49■□□□□ 0.39
SNCA-203ENST00000394986 OR2T5Q6IEZ7 315 aa17.49■□□□□ 0.39
SNCA-203ENST00000394986 HMBOX1Q6NT76 420 aa17.49■□□□□ 0.39
SNCA-203ENST00000394986 OR9Q2Q8NGE9 314 aa17.49■□□□□ 0.39
SNCA-203ENST00000394986 OR6N1Q8NGY5 312 aa17.49■□□□□ 0.39
SNCA-203ENST00000394986 OR2T29Q8NH02 315 aa17.49■□□□□ 0.39
SNCA-203ENST00000394986 OR6X1Q8NH79 312 aa17.49■□□□□ 0.39
SNCA-203ENST00000394986 ASB10Q8WXI3 467 aa17.49■□□□□ 0.39
SNCA-203ENST00000394986 RSRC1Q96IZ7 334 aaKnown RBP17.49■□□□□ 0.39
SNCA-203ENST00000394986 MMADHCQ9H3L0 296 aaPredicted RBP17.49■□□□□ 0.39
SNCA-203ENST00000394986 CRLF2Q9HC73 371 aa17.49■□□□□ 0.39
SNCA-203ENST00000394986 FAM221AA4D161 298 aa17.48■□□□□ 0.39
SNCA-203ENST00000394986 KRT36O76013 467 aa17.48■□□□□ 0.39
SNCA-203ENST00000394986 SEC14L2O76054 403 aa17.48■□□□□ 0.39
SNCA-203ENST00000394986 CSNK1A1P48729 337 aa17.48■□□□□ 0.39
SNCA-203ENST00000394986 CTXN1P60606 82 aa17.48■□□□□ 0.39
SNCA-203ENST00000394986 CEACAM16Q2WEN9 425 aa17.48■□□□□ 0.39
SNCA-203ENST00000394986 ZBED5Q49AG3 693 aa17.48■□□□□ 0.39
SNCA-203ENST00000394986 HIKESHIQ53FT3 197 aa17.48■□□□□ 0.39
SNCA-203ENST00000394986 C1orf146Q5VVC0 180 aa17.48■□□□□ 0.39
SNCA-203ENST00000394986 SEZ6L2Q6UXD5 910 aa17.48■□□□□ 0.39
SNCA-203ENST00000394986 ABHD12BQ7Z5M8 362 aaPredicted RBP17.48■□□□□ 0.39
SNCA-203ENST00000394986 OR52N5Q8NH56 324 aa17.48■□□□□ 0.39
SNCA-203ENST00000394986 SLCO4A1Q96BD0 722 aa17.48■□□□□ 0.39
SNCA-203ENST00000394986 PIK3IP1Q96FE7 263 aa17.48■□□□□ 0.39
SNCA-203ENST00000394986 ADAD1Q96M93 576 aaKnown RBP17.48■□□□□ 0.39
SNCA-203ENST00000394986 MUS81Q96NY9 551 aa17.48■□□□□ 0.39
SNCA-203ENST00000394986 KRCC1Q9NPI7 259 aaPredicted RBP17.48■□□□□ 0.39
SNCA-203ENST00000394986 RASSF1Q9NS23 344 aa17.48■□□□□ 0.39
SNCA-203ENST00000394986 IL20RAQ9UHF4 553 aa17.48■□□□□ 0.39
SNCA-203ENST00000394986 SIGLEC7Q9Y286 467 aa17.48■□□□□ 0.39
SNCA-203ENST00000394986 SAMHD1Q9Y3Z3 626 aaKnown RBP17.48■□□□□ 0.39
SNCA-203ENST00000394986 UNC119BA6NIH7 251 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 FKBP6O75344 327 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 CST1P01037 141 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 HRGP04196 525 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 PGA4P0DJD7 388 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 PGA3P0DJD8 388 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 DAP3P51398 398 aaKnown RBP17.47■□□□□ 0.39
SNCA-203ENST00000394986 HMGA2P52926 109 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 IST1P53990 364 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 FXYD6P3P58550 94 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 FBXW10Q5XX13 1052 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 PGBD2Q6P3X8 592 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 THSD4Q6ZMP0 1018 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 OR1K1Q8NGR3 316 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 HSD17B8Q92506 261 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 ZNF566Q969W8 418 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 SLC25A44Q96H78 314 aaPredicted RBP17.47■□□□□ 0.39
SNCA-203ENST00000394986 HS3ST6Q96QI5 342 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 TSPAN32Q96QS1 320 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 ULBP2Q9BZM5 246 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 REEP1Q9H902 201 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 ITPR2Q14571 2701 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 A0A096LPE4 126 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 A0A1W2PPR1 153 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 A0A1W2PPZ6 126 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 RPL36A-HNRNPH2H7BZ11 118 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 PTP4A3O75365 173 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 ERVK-25P63136 954 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 ARF1P84077 181 aaKnown RBP17.47■□□□□ 0.39
SNCA-203ENST00000394986 TGFBR3Q03167 851 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 CCNIQ14094 377 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 PPA1Q15181 289 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 TIMM23BQ5SRD1 257 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 ARMC4Q5T2S8 1044 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 OR7E24Q6IFN5 339 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 WDR31Q8NA23 367 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 SYT14Q8NB59 555 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 TMEM54Q969K7 222 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 LRR1Q96L50 414 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 KATNB1Q9BVA0 655 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 POLDIP3Q9BY77 421 aaKnown RBP17.47■□□□□ 0.39
SNCA-203ENST00000394986 CLEC4MQ9H2X3 399 aaPredicted RBP17.47■□□□□ 0.39
SNCA-203ENST00000394986 TXNIPQ9H3M7 391 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 NELFAQ9H3P2 528 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 NPAP1Q9NZP6 1156 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 ZNF346Q9UL40 294 aaKnown RBP17.47■□□□□ 0.39
SNCA-203ENST00000394986 ADAM18Q9Y3Q7 739 aa17.47■□□□□ 0.39
SNCA-203ENST00000394986 APCP25054 2843 aa17.46■□□□□ 0.39
SNCA-203ENST00000394986 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.46■□□□□ 0.39
SNCA-203ENST00000394986 TRMUO75648 421 aaKnown RBP17.46■□□□□ 0.39
SNCA-203ENST00000394986 CCNB2O95067 398 aa17.46■□□□□ 0.39
SNCA-203ENST00000394986 IGHG1P01857 330 aa17.46■□□□□ 0.39
SNCA-203ENST00000394986 LOXP28300 417 aaPredicted RBP17.46■□□□□ 0.39
SNCA-203ENST00000394986 RPL4P36578 427 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms