RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 RLN1P04808 185 aa9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 GABRA1P14867 456 aa9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 HPGDP15428 266 aa9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 ATF4P18848 351 aaPredicted RBP9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 HNRNPA2B1P22626 353 aaKnown RBP9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 GALNSP34059 522 aa9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 PRSS3P35030 304 aa9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 IGLV3-21P80748 117 aaPredicted RBP9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 TMEM255AQ5JRV8 349 aa9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 CLVS2Q5SYC1 327 aa9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 OR5M10Q6IEU7 315 aa9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 TSSK4Q6SA08 328 aa9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 SLC36A1Q7Z2H8 476 aa9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 C7orf57Q8NEG2 295 aa9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 RGP1Q92546 391 aaPredicted RBP9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 RASD2Q96D21 266 aa9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 CLIP3Q96DZ5 547 aa9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 SLC25A21Q9BQT8 299 aaPredicted RBP9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 TMEM138Q9NPI0 162 aa9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 CA10Q9NS85 328 aa9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 CKLFQ9UBR5 152 aa9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 YBX2Q9Y2T7 364 aaKnown RBP9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 MRPS2Q9Y399 296 aaKnown RBP9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 PCDHGA5Q9Y5G8 931 aa9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 LAMA2P24043 3122 aaKnown RBP9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 A0A0A6YYH2 397 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 TMEM72A0PK05 275 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 A6NJ64 397 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 PYCARD-AS1I3L0S3 204 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 ARPC5O15511 151 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 NMBP08949 121 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 OR8G3PP0DMU2 310 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 GTF2F2P13984 249 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 S1PR1P21453 382 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 CSF2RBP32927 897 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 CD96P40200 585 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 KIR2DL1P43626 348 aaPredicted RBP9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 TAS2R19P59542 299 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 CTXN1P60606 82 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 UBXN2BQ14CS0 331 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 RAB11BQ15907 218 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 ZNF74Q16587 644 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 FDX2Q6P4F2 183 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 ARSKQ6UWY0 536 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 TAF8Q7Z7C8 310 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 CCDC36Q8IYA8 594 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 LSM14AQ8ND56 463 aaKnown RBP9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 OR5T3Q8NGG3 340 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 OR4C16Q8NGL9 310 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 OR6K3Q8NGY3 331 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 ZDHHC1Q8WTX9 485 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 DCBLD2Q96PD2 775 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 REG4Q9BYZ8 158 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 DNTTIP1Q9H147 329 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 APMAPQ9HDC9 416 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 MYOZ1Q9NP98 299 aaPredicted RBP9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 HRASLS2Q9NWW9 162 aa9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 MRM2Q9UI43 246 aaKnown RBP9.15□□□□□ -0.95
UBE2D3-208ENST00000394803 LOC100289279A0A1B0GTE1 492 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 POM121BA6NF01 834 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 OR4C45A6NMZ5 311 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 BLOC1S5-TXNDC5H3BN57 136 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 GNB5O14775 395 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 SCAMP1O15126 338 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 RDH16O75452 317 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 SCO1O75880 301 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 ABHD16AO95870 558 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 IGKV1D-16P01601 117 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 HRGP04196 525 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 CD2P06729 351 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 FGF2P09038 288 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 AKT2P31751 481 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 SLC6A8P48029 635 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 MAZP56270 477 aaKnown RBP9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 CLDN12P56749 244 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 PRSS41Q7RTY9 318 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 FAM122BQ7Z309 247 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 EXD3Q8N9H8 876 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 RCBTB1Q8NDN9 531 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 OR2G2Q8NGZ5 317 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 COQ8AQ8NI60 647 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 TSEN15Q8WW01 171 aaKnown RBP9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 TMEM106AQ96A25 262 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 ELSPBP1Q96BH3 223 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 Q96M85 177 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 INTS14Q96SY0 518 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 SHARPINQ9H0F6 387 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 TSPAN10Q9H1Z9 355 aaPredicted RBP9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 LDAHQ9H6V9 325 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 EXO5Q9H790 373 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 PRTFDC1Q9NRG1 225 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 UBQLN4Q9NRR5 601 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 FRRS1LQ9P0K9 344 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 CPNE7Q9UBL6 633 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 ERVK-19Q9WJR5 959 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 KCNMB2Q9Y691 235 aa9.14□□□□□ -0.95
UBE2D3-208ENST00000394803 TRBV23OR9-2A0A075B6M9 112 aa9.13□□□□□ -0.95
UBE2D3-208ENST00000394803 FXYD6-FXYD2A0A087WZ82 144 aa9.13□□□□□ -0.95
UBE2D3-208ENST00000394803 RFPL4AA6NLU0 287 aa9.13□□□□□ -0.95
UBE2D3-208ENST00000394803 GRXCR1A8MXD5 290 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms